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Job DescriptionP09836
Confidence100.00%DateThu Jan 5 11:02:32 GMT 2012
Rank4Aligned Residues394
% Identity13%Templatec3o7pA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:l-fucose-proton symporter; PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   33......40.........50.........60.........70.........80.........90.........100.........110..
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Query Sequence  LTIWLGYALFYFTRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF
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Template Sequence  IIPFALLCSLFFLWAVANNLNDILLPQFQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALF
Template Known Secondary structure  TTT

TTTTS
T
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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   113.. ....120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  GFS. . . TSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPIVMAAAALHYGWRAGMMI
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Template Conservation    
              
 
             
        
             
          
            
Template Sequence  WPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVPHQSQDV
Template Known Secondary structure  TT
SS
GGGTTSSSS



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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   190.........200.........210.. .......220.........230.........240.........250.........260
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Query Sequence  AGCMAIVVGIFLCWRLRDRPQAL. . . . . . . . . GLPAVGEWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYV
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Template Conservation                                                                                  
Template Sequence  LDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQF
Template Known Secondary structure  S
TTS




TTT



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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   261........270.........280. ........290.........300.........310.........320.........330.........
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Query Sequence  LVYVVRAAINDWGNLYMSETL. GVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM
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Template Sequence  CYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK. . . . . . VLAAYALIAMALCLIS
Template Known Secondary structure  STT

S
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   269270.........280.........290.........300.........310.........320...... ...330.........340..
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  PFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLAGWPLAKVLDTWHWSGFFVVISIA
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Template Sequence  AFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYG. . SSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL
Template Known Secondary structure  S
TTSS
GGG..GGGTSSGGGG
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   343......350.........360.........370.........380... ......390.........400.........410.........420
 
   420.........430....
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Query Sequence  AGISALLLLPFLNAQ
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Template Conservation            
  

Template Sequence  CFAVIFIFARFRSQT
Template Known Secondary structure  TS



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   421........430.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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