Job Description P09836 Confidence 0.82% Date Thu Jan 5 11:02:32 GMT 2012 Rank 99 Aligned Residues 108 % Identity 13% Template c3dinF_ PDB info PDB header:membrane protein, protein transport Chain: F: PDB Molecule:preprotein translocase subunit secy; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase Resolution 4.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	A	P	L	M	T	D	K	Y	E	I	D	A	R	Y	R	Y	W	R	R	H	I	L	L	T	I	W	L	G	Y	A	L	F	Y	F	T	R	K	S	F	N	A	A	V	P	E	I	L	A	N	G	V	L	S	R	S	D	I	G	L	L	A	T	L	F	Y	I	T	Y	G	V	S	K	F	V	S	G	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		P	S	L	K	E	M	L	R	E	G	E	E	G	R	K	K	F	A	K	Y	T	R	R	L	T	L	L	I	G	G	F	Q	A	F	F	.	.	.	.	.	.	V	S	F	S	L	A	R	S	N	P	D	M	V	A	P	G	V	N	V	L	Q	F	T	V	L	S	T	M	S	M	L	A	G	T	M	F	L	L	W
Template Known Secondary structure			S	S	S	S		S			T	T																									.	.	.	.	.	.										S	S								S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	R	S	N	A	R	Y	F	M	G	I	G	L	I	A	T	G	I	I	N	I	L	F	G	F	S	T	S	L	W	A	F	A
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	G	E	R	I	T	E	.	K	G	I	G	N	G	I	S	I	L	I	F	A	G	I	V	A	R	Y	P	S	Y	I	R	Q	A	Y
Template Known Secondary structure							T	T	.	T	T		T	T														S	T	T	S	S	S			S
Template Predicted Secondary structure									.
Template SS confidence
		174	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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