Job Description P0AB71 Confidence 95.53% Date Thu Jan 5 11:14:46 GMT 2012 Rank 62 Aligned Residues 213 % Identity 13% Template d1xcfa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																.	.											.	.
Query SS confidence																.	.											.	.
Query Sequence		D	D	V	Q	K	V	F	Q	V	A	K	E	N	N	.	.	F	A	L	P	A	V	N	C	V	G	.	.	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A
Query Conservation																.	.											.	.
Alig confidence																.	.											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	L	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	T	P	A	Q	C	F
Template Known Secondary structure													T	T	T											S	S	S																T		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																					.	.	.	.	.	.	60	.
		92	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure											.																		.	.	.
Query SS confidence											.																		.	.	.
Query Sequence		H	H	V	H	Q	M	A	E	H	.	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	.	.	.	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K
Query Conservation											.																		.	.	.
Alig confidence											.																		.	.	.											.	.	.	.	.	.	.	.	.	.	.									.	.							.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.									.	.							.	.	.	.
Template Sequence		E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	R	C	E	K	V	G	.	.	.	.	.	.	.	.	.	.	.	V	D	S	V	L	V	A	D	.	.	V	P	V	E	E	S	.	.	.	.	A	P	F	R	Q	A	A	L	R
Template Known Secondary structure												S	S	S																											T	.	.	.	.	.	.	.	.	.	.	.							T	T	.	.			G	G	G		.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.									.	.							.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130			.	.	.	.	.	.					.	.	.	140	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.											.	.													.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.											.	.													.	.	.	.	.	.
Template Sequence		H	N	V	A	P	I	F	I	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	A	D	D	D	L	L	.	.	.	.	.	R	Q	I	A	S	Y	G	R	G	F	.	.	T	Y	L	L	S	R	A	A	A	L	P	L	.	.	.	.	.	.	N	H	L	V	A	K	L	K	E
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							.	.	.	.	.									S		.	.													.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.											.	.													.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.																			.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.											.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	.	.	.	.	.	.	.	.	.	.	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.										.																									.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.										.
Template Sequence		Y	N	.	.	.	.	.	.	.	.	.	A	A	P	P	L	Q	G	F	G	.	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.	.									S	.	S												T	T		S														T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.										.
Template SS confidence
		203	.										.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions