Job Description P0AB71 Confidence 85.64% Date Thu Jan 5 11:14:46 GMT 2012 Rank 123 Aligned Residues 186 % Identity 17% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	.	.	E
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																												.	.	.
Template Sequence		A	V	E	L	A	K	A	A	E	R	A	A	R	E	L	G	V	N	I	V	V	A	P	N	H	L	.	.	.	E	L	G	L	V	S	Q	S	V	D	I	P	V	Y	A	Q	G	A	D	V	E	A	G	G	A	H	T	A	H	V	S	L	E	N	I	K	E	A	G	G	S	G	V	I	L	N	H	S	E	A	P
Template Known Secondary structure																	T									G	G	.	.	.	G						T	T		S	S		B			S			S	B	S	S		S	S		T	T			B								T									T	T	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G
Query Conservation
Alig confidence							.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation							.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Template Sequence		L	K	L	N	D	.	.	.	.	L	A	R	L	V	A	K	A	K	S	L	G	L	D	V	V	V	C	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	R	T	S	.	.	.	.	.	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G
Template Known Secondary structure							.	.	.	.											T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					.	.	.	.	.						T			S							G	G	G	T	T
Template Predicted Secondary structure							.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Template SS confidence
		98	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																						.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A	N	E
Query Conservation
Alig confidence						.																								.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																								.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	R	A	.	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	.	.	.	.	.	S	V	I	T	G	A	G	I	E	S	G	D	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	K	A	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S			.																					T	T	S	.	.	.	.	.						S	S			S										T	T		S										T		S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																								.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	Q	G	Q	L	G	N	P	K	G	E	D	Q	P	N	K	K	Y	Y	D	P	R	V	W	L	R	A	G	Q	T	S	M	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	Y	A	K	I	V	E	L	A	K	P	L	S	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions