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Job DescriptionP0AB71
Confidence96.06%DateThu Jan 5 11:14:46 GMT 2012
Rank54Aligned Residues188
% Identity16%Templated1vjia_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHT. . . . . . . . . .
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Template Sequence  VEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGF. . . . . . . . . . . . . . . . . . . . . . . . . QPNGKAPISCSDKPLMPQIRSN
Template Known Secondary structure  TT


TTSS
GGG.........................SGGG


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   110.........120.........130.........140......... 150.........160..
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Query Sequence  . . . . . . . DHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEE. . . . . . . . . . . . . . . . . . . . SLQENIEICSKYL
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Template Sequence  GIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIV
Template Known Secondary structure  SSSSBSS




GGGST
S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  ERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTIL
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Template Sequence  DAVAK. . . . . . . EIGPDR. VGIRLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIEARMHT. . . . . . . . . . . . . L
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GGG.
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   221.... ....230. ........240.........250.........260.........270........ .
 
   243......250.........260.........270.........280....
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Query Sequence  RDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVV
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Template Sequence  MPMRKAF. . . . . . . . . KGTFISAGG. . FTREDGNEAVSKGRT
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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