Job Description P0AB71 Confidence 90.21% Date Thu Jan 5 11:14:46 GMT 2012 Rank 108 Aligned Residues 144 % Identity 15% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T
Query Conservation
Alig confidence																.									.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																.									.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		L	D	L	K	R	V	R	E	A	V	D	L	P	L	.	L	R	K	D	F	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	M	L	E	E	A	R	A	F	G	A	S	A	A	L	L	I	V	A	L	L	G	.	.	.	.	.	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E
Template Known Secondary structure													S			.				S				S	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S										G	.	.	.	.	.	G	G												T
Template Predicted Secondary structure																.									.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.															.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.															.	.	.	.	.	.
Template Sequence		A	L	V	E	V	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	E	L	.	.	.	.	.	E	I	A	L	E	A	G	A	E	V	L	G	I	N	.	.	.	.	.	.	N	R	D	L	A	T	L	H	I	N	L	E	T	A	P	R	L	G	R	L	A	R	K
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.							T		S						.	.	.	.	.	.	S	B		T	T	T			B		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.															.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.																						.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T
Query Conservation
Alig confidence			.	.	.	.																			.	.
Template Conservation			.	.	.	.																			.	.
Template Sequence		R	.	.	.	.	G	F	G	G	V	L	V	A	E	S	G	Y	S	R	K	E	E	L	.	.	K	A	L	E	G	L	F	D	A	V	L	I	G	T	S	L
Template Known Secondary structure		T	.	.	.	.	T			S						S				S					.	.		T	T	T	T	T		S
Template Predicted Secondary structure			.	.	.	.																			.	.
Template SS confidence
		205					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions