Job Description P0AB71 Confidence 97.10% Date Thu Jan 5 11:14:46 GMT 2012 Rank 38 Aligned Residues 237 % Identity 11% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.
Predicted Secondary structure															.							.	.	.																																																	.
Query SS confidence															.							.	.	.																																																	.
Query Sequence		V	Q	K	V	F	Q	V	A	K	E	N	N	F	.	A	L	P	A	V	N	.	.	.	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	.	L	G	A	I	S	G	A	H
Query Conservation															.							.	.	.																																																	.
Alig confidence															.							.	.	.																																																	.
Template Conservation
Template Sequence		V	S	D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E
Template Known Secondary structure												T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L
Query Conservation
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.
Template Conservation															.																						.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.
Template Sequence		M	L	R	E	V	T	P	E	L	S	C	P	V	.	V	L	L	S	Y	Y	K	P	I	M	F	R	S	L	A	K	M	K	E	A	G	.	.	.	.	.	.	.	.	.	.	.	V	H	G	L	I	V	P	D	.	.	L	P	Y	V	A	.	.	.	.	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L
Template Known Secondary structure							G	G	G		S	S			.						S					S			T						T	T	.	.	.	.	.	.	.	.	.	.	.							T	T	.	.			T	T	T	.	.	.	.											T	T
Template Predicted Secondary structure															.																						.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.			.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																																										.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																																										.	.	.
Template Sequence		V	L	L	T	T	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	D	R	M	.	.	.	.	.	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	.	.	.
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						.	.	.	.	.									S							S	S			B		T	T	S		B		T														.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																																										.	.	.
Template SS confidence
		147	.	.	150	.	.	.																			.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.										.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																				.																							.	.	.	.	.	.	.	.	.
Query SS confidence																				.																							.	.	.	.	.	.	.	.	.
Query Sequence		H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	.	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	.	.	.	.	.	.	.	.	.	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A
Query Conservation																				.																							.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.						.	.						.																							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.						.	.
Template Sequence		.	.	.	.	.	.	N	K	P	V	A	.	.	V	G	F	G	I	S	K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G
Template Known Secondary structure		.	.	.	.	.	.	S	S				.	.			S				S										T	T		S														S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.						.	.
Template SS confidence
								201	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions