Job Description P0AB71 Confidence 95.85% Date Thu Jan 5 11:14:46 GMT 2012 Rank 59 Aligned Residues 240 % Identity 15% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90
Predicted Secondary structure																.	.									.	.																																														.
Query SS confidence																.	.									.	.																																														.
Query Sequence		D	D	V	Q	K	V	F	Q	V	A	K	E	N	N	.	.	F	A	L	P	A	V	N	C	.	.	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	.	A	I	L	G	A	I	S	G
Query Conservation																.	.									.	.																																														.
Alig confidence																.	.									.	.																																														.
Template Conservation
Template Sequence		E	R	Y	E	N	L	F	A	Q	L	N	D	R	R	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C
Template Known Secondary structure														T	T										T	T	S	S															T	T		S	S								S			T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		91	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																															.
Query SS confidence													.																															.
Query Sequence		A	H	H	V	H	Q	M	A	E	H	Y	.	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	.	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I
Query Conservation													.																															.
Alig confidence													.													.	.	.	.	.	.	.	.	.										.																.	.					.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																										.	.					.	.	.	.
Template Sequence		F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	.	.	.	.	.	.	.	.	.	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	.	.	V	P	V	E	.	.	.	.	E	S	A	P	F	R	Q	A	A	L	R	H
Template Known Secondary structure													S	S	S											.	.	.	.	.	.	.	.	.			T	T													T							T	T	.	.			G	G	.	.	.	.	G											T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																										.	.					.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y
Query Conservation
Alig confidence						.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																													.	.	.
Template Conservation						.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																													.	.	.
Template Sequence		N	I	A	P	.	.	.	I	F	I	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	A	D	D	D	L	L	.	.	.	.	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	.	.	.	H	H	L	I	E	K	L	K	E	Y
Template Known Secondary structure		T				.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							.	.	.	.									S						S	S	S	S				S	S	S					.	.	.										T
Template Predicted Secondary structure						.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																													.	.	.
Template SS confidence
		147	.	.	150				.	.	.	.	.																.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.											.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																								.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	.	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	.	.	.	.	.	.	.	.	.	.	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A
Query Conservation																								.																							.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.							.	.					.																							.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.							.	.
Template Sequence		H	.	.	.	.	.	.	.	.	.	A	A	P	A	L	Q	.	.	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.							.	.		S	S			S										T	T		S															T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		204										.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions