Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB71
Confidence89.84%DateThu Jan 5 11:14:46 GMT 2012
Rank111Aligned Residues113
% Identity19%Templated1goxa_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210.........220.........230.........240.........250.........260.........270........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  QPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDS
Query Conservation   



      

  



 






 

 

     
    
 

   
          











 
 
  
Alig confidence 




.....














...
























.......



















Template Conservation     

.....  
   


 
 


...



 

        
  
      ....... 
 







 
 

 


Template Sequence  TAEDA. . . . . RLAVQHGAAGIIVSN. . . HGARQLDYVPATIMALEEVVKAAQG. . . . . . . RIPVFLDGGVRRGTDVFKAL
Template Known Secondary structure  S.....TT
S

...GGGTSSTT


TTT.......SS
SS

S
Template Predicted Secondary structure 
.....





...













.......






Template SS confidence 















































































   234.... .240.........250... ......260.........270........ .280.........290........
 
   279280.........290.........300.........310.........320.........330.........340.........350........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  VSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDV
Query Conservation 
  

 



 


  
   


                       

   


  
     

   
       

 
 
Alig confidence 
.






















...............................























Template Conservation 
.





 


  
  
   
  
...............................
   
  
  

   
 
 
   
Template Sequence  A. LGAAGVFIGRPVVFSLAAEGEAG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VKKVLQMMRDEFELTMALSGCRSL
Template Known Secondary structure  .T
S
...............................T
SBT
Template Predicted Secondary structure  .







...............................



Template SS confidence 















































































   299 300.........310.........320.. .......330.........340......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions