Job Description P0AB71 Confidence 95.12% Date Thu Jan 5 11:14:46 GMT 2012 Rank 70 Aligned Residues 142 % Identity 15% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.																		.	.
Query Sequence		V	I	T	G	D	D	V	Q	K	V	F	Q	V	A	K	E	N	N	F	A	L	P	A	V	N	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	.	.	.	.	.	.	.	.	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.																		.	.
Alig confidence															.	.																							.	.	.	.													.	.	.	.	.	.	.	.																		.	.
Template Conservation															.	.																							.	.	.	.
Template Sequence		A	L	G	E	D	D	L	P	K	V	A	E	Y	.	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	R	L	L	S	K	A	G	S	.	.	.	.	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G
Template Known Secondary structure				S	G	G	G								.	.		S						G	G	G	T	T									G	G	.	.	.	.	G		S								T	T																T	T
Template Predicted Secondary structure															.	.																							.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
						82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	.	.	.	.	.	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H	P	E	P	E	K
Template Known Secondary structure		B			S		S	S	S	S	S	B			T	T									B	S	S						T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G												T		S						B		S		T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.														.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
					145	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.					.
Query SS confidence		.	.	.					.
Query Sequence		.	.	.	D	L	S	E	.	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L
Query Conservation		.	.	.					.
Alig confidence		.	.	.					.
Template Conservation
Template Sequence		A	L	S	D	G	K	Q	S	L	D	F	E	L	F	K	E	L	V	Q	E	M	K	K	L	A	D	A	L	G	V	K	V
Template Known Secondary structure			S	S	S	G	G	G		B																				T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions