 |
Job Description | P0AB71 | Confidence | 74.37% | Date | Thu Jan 5 11:14:46 GMT 2012 |
Rank | 157 | Aligned Residues | 103 |
% Identity | 19% | Template | c3o6cA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; |
PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni
|
Resolution | 1.87 Å |
|
 |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | Y | T | Q | P | E | D | V | D | Y | A | Y | T | E | L | S | K | I | S | P | R | F | T | I | A | A | . |
. |
. |
S | F | G | N | V | H | G | V | Y | K | P | G | N | V | V | L | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | I | L | R | D | S | Q | E | Y | V | S | K | K | H | N |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
| . | . | . |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|   | . | . | . |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
S | L | F | I | N | P | S | L | E | D | . |
. |
. |
I | E | K | S | K | I | L | K | A | Q | F | I | E | L | H | T | G | H | Y | A | N | L | H | N | A | L | F | S | N | I | S | H | T | A | F | A | L | K | E | L | D | Q | D | K | K | T | L | Q | A | Q | F | E | K | E | L | Q | N | L | E | L | C | A | K | K | G | L | E |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|  |  |  | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | S | S | G | G | G | S | T | T |
|
| G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | |
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | |
. | . | . | . | . | . | . | . | 290 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | H | N | S | L | N | F | V | F | H | G | G | S | G | S | T | A | Q | E | I | K | D | S | V | S | Y | . |
G | V | V | K | M | N | I | D | T | D | T | Q | . |
. |
. |
. |
. |
W | A | T | W | E | G | V | L | N | Y | Y | K |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   | . |
|
|   |
|
|
|
|   |
|
|
|   | . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . | . | . |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |
Template Sequence |   |
L | G | . |
. |
. |
. |
. |
L | K | V | A | A | G | H | G | L | N | Y | K | N | V | K | P | V | V | K | I | K | E | I | C | E | L | N | I | G | Q | S | I | V | A | R | S | V | F | T | G | L | Q | N | A | I | L | E | X | K | E |
Template Known Secondary structure |   |
T | T | . | . | . | . | . |
|  |  |  |  |
| T | T |
|
| T | T | T | T |  |  |  |  | T |
| T | T |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
202 | . | |
|
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|