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Job DescriptionP0AB71
Confidence23.16%DateThu Jan 5 11:14:46 GMT 2012
Rank337Aligned Residues198
% Identity12%Templatec3nm3D_
PDB info PDB header:transferaseChain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170..... ....180..... ...
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Query Sequence  EKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIE. . . . . . . . . . . LGCTGGEEDG. . . . . . . . VDN
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Template Sequence  YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGP
Template Known Secondary structure  SS



SSS
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T
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   189190........ .200.........210.........220.........230.........240.........250.........260......
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Query Sequence  SHMDASALYT. . QPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHG
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Template Sequence  DMVIGWSVGFPEEVDEL. . . . . SKMGPDMVDYIGVG. . TLFPTLTKKNKKMGTAGAIRVLDALERNN. . . AHWCRTVGIG
Template Known Secondary structure  TS
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   108.110.........120.... .....130........ .140.........150.........160....... ..170.......
 
   267..270......... 280.........290... ......300.........310.........320.........330...
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Query Sequence  GSGSTAQEIKDSV. . . . . . . . SYGVVKMNIDTDTQ. . . . . WATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRV
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Template Sequence  . . GLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKF. . . . . . . VNIGLSTKNSLTTTD
Template Known Secondary structure  ..S

TTT
B
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SSTTTTT
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   181........190.........200.........210.........220.........230...... ...240.........250.
 
   334.....340....
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Query Sequence  WLRAGQTSMIA
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Template Sequence  EIQSIISNTLK
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   252.......260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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