Job Description P0AB71 Confidence 57.02% Date Thu Jan 5 11:14:46 GMT 2012 Rank 203 Aligned Residues 120 % Identity 16% Template c3n2xB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate Resolution 2.20 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	.	.	.	.	.	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	.	R	V	P	V	L	I	G	T	G	G	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	T	I	E	L	S
Template Known Secondary structure										T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	.	S	S								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.																.	.	.	.	.	.	100	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	.	.	.	.	.	G	G	S	G	S	T	A	Q	E	I	K	D	S
Query Conservation																																																																.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.																						.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.	.	.	.															.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	.	.	.	.	.	.	.	.	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	.	.	.	.	.	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L
Template Known Secondary structure		.	.	.	.	.							T		S						.	.	.	.	.	.	.	.			S	S	S																	.	.	.	.	.	T		S	S												S	S
Template Predicted Secondary structure		.	.	.	.	.															.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
							102	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		279	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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