Job Description P0AB71 Confidence 98.13% Date Thu Jan 5 11:14:46 GMT 2012 Rank 18 Aligned Residues 200 % Identity 15% Template c3gndC_ PDB info PDB header:lyase Chain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate Resolution 2.90 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K
Query Conservation
Alig confidence																			.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	.	.	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	N	R	P	V	V	L	R	A	S	G	A	N	S	I
Template Known Secondary structure		S		T	T		T	T					T	G	G	G	G	G	.	.	G		S													S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G											S			T
Template Predicted Secondary structure																			.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																												.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A
Query Conservation
Alig confidence																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	.	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S		T	T						S								T	T		S								T	T	S	T	T		.																		T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	.
Query Conservation																																																																																	.
Alig confidence		.	.											.															.	.	.	.	.	.	.				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.											.															.	.	.	.	.	.	.				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		.	.	R	D	Q	R	Y	F	S	L	A	T	.	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	.	.	.	.	.	.	.	Y	V	E	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	.	.	.	.	.	.	.	.	.	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A
Template Known Secondary structure		.	.											.							T		S						.	.	.	.	.	.	.			T	.	.	.	.	.	.	.	T	T							T		.	.	.	.	.	.	.	.	.	S	S								S
Template Predicted Secondary structure		.	.											.															.	.	.	.	.	.	.				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
				182	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.								.	210	.	.	.	.	.	.	.	.										.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
					275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																				.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.
Query Sequence		.	.	.	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	Q	.	.	.	.	.	W	A	T	W	E	G	V	L	N	Y	Y	K	A	N
Query Conservation		.	.	.																				.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K	A	V	Q	A	V	V	H	H	N
Template Known Secondary structure											T	T							S					T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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