Job Description P0AB71 Confidence 97.42% Date Thu Jan 5 11:14:46 GMT 2012 Rank 35 Aligned Residues 233 % Identity 12% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	Q	K	V	F	Q	V	A	K	E	N	N	F	A	L	P	A	V	N	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q
Query Conservation
Alig confidence																																.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																																.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		S	A	G	A	K	F	R	A	A	V	A	A	E	Q	P	L	Q	V	V	G	A	I	T	A	Y	A	A	K	M	A	.	.	.	.	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	.	.	.	.	.	.	.	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R
Template Known Secondary structure														S	S	S							S	S								.	.	.	.			T	T		S																S	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150														.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	N	I	E	I	C	S	K	Y	L	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	.	.	.	.	.	.	.	.	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D
Template Known Secondary structure								S							T	T		S	S	S								.	.	.	.	.	.	.	.							T	T		S							B						T	T							B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.	.	.	.	.					.	.	.	.	.	.	.
Template Sequence		A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	.	G	A	D	M	I	F	P	.	.	.	.	.	E	A	M	K	.	.	.	.	.	.	.	T	L	D	D	Y	R
Template Known Secondary structure				S		T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	T		S					.	.	.	.	.					.	.	.	.	.	.	.	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.	.	.	.	.					.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.						190	.	.	.								.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	.	.	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A
Query Conservation																					.	.
Alig confidence								.	.	.	.	.	.	.	.	.					.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		R	F	K	E	A	V	.	.	.	.	.	.	.	.	.	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	M	N	K	A	A	L	N	F	Y	E	T
Template Known Secondary structure								.	.	.	.	.	.	.	.	.		S		B						T	T	S	S	S											T	T								S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions