Job Description P0AB71 Confidence 49.17% Date Thu Jan 5 11:14:46 GMT 2012 Rank 228 Aligned Residues 191 % Identity 14% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		L	N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	F	P	V	S	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	K	.	.	.	.
Template Known Secondary structure																T	T	T		S							T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			S	S								S		.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.											.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																					.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	.	.	.	.	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	.	.	.	.	.	.	.	.	.	.	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E
Query Conservation																					.	.	.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.										.	.	.	.																.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	A	D	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I	H	T	G	I	G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.												T	T		S	S										S							T	S	T	T			T	T	T	T														S	S								S	T	T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																																				.	.	.
Template SS confidence
												78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	.	N	L	P	H	N	S	L	N	F
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	.	G	A	D	V	V	N	I	P	.	.	.	.	.	.	.	.	.	D	T	T	G	Y	X	L	P	W	Q	Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	S														T	T	.	T		S						.	.	.	.	.	.	.	.	.		S	S	S																			T	T	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.	.	.	.	.	.
Template SS confidence
															145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T
Template Known Secondary structure				B		S	S	S											T	T	T							B
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions