Job Description P0AB71 Confidence 81.77% Date Thu Jan 5 11:14:46 GMT 2012 Rank 135 Aligned Residues 149 % Identity 11% Template c3dz1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution Resolution 1.87 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	.	.	.	.	.	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																		.	.						.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.						.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	S	I	D	R	L	T	D	F	Y	A	E	V	G	C	E	G	V	T	V	L	G	I	L	G	E	A	P	K	L	D	A	A	E	A	E	A	V	A	T	R	F	I	K	R	A	.	.	K	S	X	Q	V	.	.	.	I	V	G	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Template Known Secondary structure															T	T		S					S	T	G	G	G	T	G	G	G	S																	.	.	T	T	S			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																	.	.						.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.				.	.	80	.	.	.																	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	.	.	.	.	.	G	G	S	G	S	T	A	Q
Query Conservation																																																																					.	.	.	.	.
Alig confidence											.																.	.	.	.	.																						.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation											.																.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		G	F	A	A	X	R	R	L	A	.	R	L	S	X	D	A	G	A	A	G	V	X	I	A	P	.	.	.	.	.	P	P	S	L	R	T	D	E	Q	I	T	T	Y	F	R	Q	A	T	E	A	I	.	.	.	.	.	.	.	G	D	D	V	P	W	V	L	Q	D	Y	P	L	T	L	S	V	V	X	T	P	K
Template Known Secondary structure		S									.							T		S							.	.	.	.	.		T	T			S																.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure											.																.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		274	.	.	.	.	.		280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure								.			.
Query SS confidence								.			.
Query Sequence		E	I	K	D	S	V	.	S	Y	.	G	V	V	K	M	N	I	D	T	D	T	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A
Query Conservation								.			.
Alig confidence								.			.
Template Conservation
Template Sequence		V	I	R	Q	I	V	X	D	S	A	S	C	V	X	L	K	H	E	D	W	P	G	L	E	K	I	T	T	L	R	G	F	Q	K	D
Template Known Secondary structure											S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions