Job Description P0AB71 Confidence 48.08% Date Thu Jan 5 11:14:46 GMT 2012 Rank 234 Aligned Residues 137 % Identity 12% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		T	G	D	D	V	Q	K	V	F	Q	V	A	K	E	N	N	F	A	L	P	A	V	N	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	.	.	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A
Query Conservation																																									.	.
Alig confidence																			.																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	.	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	V	F	D
Template Known Secondary structure																	T		.							S	S													T	T		S		S	S										T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.															.	.	.	.	190
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		H	H	V	H	Q	M	A	E	H	Y	.	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M
Query Conservation												.
Alig confidence												.												.	.														.	.	.	.	.
Template Conservation																								.	.														.	.	.	.	.
Template Sequence		F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	.	.	N	Q	L	T	V	N	E	W	A	I	A	A	G	.	.	.	.	.	G	H	T	R	T	G	L	E	D	N	I	R	L	D	R	Q	T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C	D	K	Y	Q	R
Template Known Secondary structure												T	T	S								T	T	.	.												T	T	.	.	.	.	.						S	T	T	T			B	S	S	S	S		B																		T	T
Template Predicted Secondary structure																								.	.														.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		171	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		264	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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