Job Description P0AB71 Confidence 91.80% Date Thu Jan 5 11:14:46 GMT 2012 Rank 97 Aligned Residues 197 % Identity 15% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																	.	.	.	.	.	.	.
Template Sequence		K	F	V	Q	E	S	A	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	I	D	V	F	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	.	.	.	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	.	.	.	.	.	.	.	P	E	R	S	N	I
Template Known Secondary structure											T	.	.	.	.	.	.	.	.	.	.	.	.									T	T			G	G	G	G										T	.	.	.	T											S		T	T		.	.	.	.	.	.	.	T	T	T		S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		661	.	.	.	.	.	.	.	.	670													.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.				.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.								.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	.	.	G	S	G	S	T	A	Q	E	I
Query Conservation																																																																							.	.
Alig confidence																	.										.	.	.	.	.	.	.	.	.																							.	.	.	.	.									.	.
Template Conservation																	.										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	.	E	G	F	H	I	L	A	I	K	.	.	.	.	.	.	.	.	.	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	.	.	.	.	.	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y
Template Known Secondary structure		S															.	T	T		S						.	.	.	.	.	.	.	.	.		T	T	S																T	T		.	.	.	.	.		S									T	T	S
Template Predicted Secondary structure																	.										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.		.	.	.	.	.	.	.	740	.										.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.						.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.
		276	.	.	.	280	.	.	.	.	.	.																											.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	S	V	S	Y	G	V	V	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	D	T	D	T	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A	N	E	A	Y	L	Q	G	Q	L	G	N	P	K	G	E	D	Q	P	N	K	K	Y	Y
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		K	Q	A	I	D	A	G	V	D	I	I	D	T	A	V	A	S	M	S	G	L	T	S	Q	P	S	A	N	S	L	Y	Y	A	L	N	G	F	P	R	H	L	R	T	D	I	E	G	M	E	S	L	S	H	Y	W	S	T	.	.	.	.	.	.	.	.	V	R	T	Y	Y	S	D	F	E	S	D	I	K	S	P
Template Known Secondary structure							T	T							B		G	G	G		S	T	T	S			B								T	T	T	S	S	S		B		S															.	.	.	.	.	.	.	.				T	T	G	G	G			S			S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840									.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	R	V	W	L	R	A	G	Q	T	S	M	I	A	R	L	E	K	A	F	Q	E	L	N	A	I	D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	E	I	Y	Q	H	E	M	P	G	G	Q	Y	S	N	L	S	Q	Q	A	K	S	L	G	L	G	E	R	F
Template Known Secondary structure			T	T																					T	T	T	S	S	T
Template Predicted Secondary structure
Template SS confidence
		858	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions