Job Description P0AB71 Confidence 43.74% Date Thu Jan 5 11:14:46 GMT 2012 Rank 245 Aligned Residues 128 % Identity 8% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	.	.	.	.	.	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	.	P	S	R	I	V	T	G	V	L	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	D	A	A	D	Q	S
Template Known Secondary structure										T	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			.	G	G	G								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.																.	.	.	.	.	.	90	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	.	.	.	.	.	G	S	G	S	T	A	Q	E	I	K	D	S
Query Conservation																																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.	.																						.	.	.	.	.	.											.	.	.	.	.
Template Conservation		.	.	.	.	.																			.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	.	.	.	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	.	.	.	.	.	.	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G	R	L
Template Known Secondary structure		.	.	.	.	.						T	T		S									S	.	.	.	S		S																			.	.	.	.	.	.	T	T														S
Template Predicted Secondary structure		.	.	.	.	.																			.	.	.																						.	.	.	.	.	.
Template SS confidence
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Y	G	V	V	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	F	P	G	I	V
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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