Job Description P0AB71 Confidence 95.41% Date Thu Jan 5 11:14:46 GMT 2012 Rank 65 Aligned Residues 243 % Identity 9% Template c2vwtA_ PDB info PDB header:lyase Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex Resolution 1.93 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		P	G	V	I	T	G	D	D	V	Q	K	V	F	Q	V	A	K	E	N	N	F	A	L	P	A	V	N	C	V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	.	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I
Query Conservation																																																	.
Alig confidence															.	.	.																			.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	A	L	L	S	N	P	F	K	E	R	L	.	.	.	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	Y	M	.	.	.	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S										.	.	.		T	T										S						.	.	.						T	T			S						T	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	.	.	.	.	.	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P
Template Known Secondary structure												T	T	S	S	S							S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T							.	.	.	.	.	S				S												S		T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.															80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
						166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V
Template Known Secondary structure		T	T					S		G	G	G	S	G	G	G	G	G	G	T	S	T	T																	S						T						T	S	T	T															T	T		T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	.	.	.	T	Q	W	A	T	W	E	G	V	L	N	Y
Query Conservation																																																				.	.	.
Alig confidence																	.	.	.										.	.	.																					.	.	.
Template Conservation																	.	.	.										.	.	.
Template Sequence		Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	.	.	.	K	A	A	G	F	L	A	V	A	.	.	.	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M	L	Y	S	D	A	L	D	Q	R	L	A	M	F
Template Known Secondary structure															T	T	.	.	.								S	S	.	.	.										T	T																							T	T
Template Predicted Secondary structure																	.	.	.										.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions