Job Description P0AB71 Confidence 96.80% Date Thu Jan 5 11:14:46 GMT 2012 Rank 41 Aligned Residues 195 % Identity 11% Template c2gq8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, fmn-binding; PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone Resolution 1.70 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	G	W	R	I	V	T	E	A	V	H	A	K	G	C	A	I	F	A	Q	L	W	H	V	G	R	V	T	H	P	D	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Q	Q	P	I	S	S	S	T	L	K	A	E	N	V	K	V	F	V
Template Known Secondary structure															T	S											T	T	S	S		G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						S	S	S				T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
											107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																					150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	H	T	D	H	C	A	K	K	L	L	P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Q	E	N	I	E	I
Query Conservation		.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	G	S	D	E	P	G	F	V	D	V	A	V	P	R	A	M	T	K	A	D	I	A	Q	V	I	A	D	Y	R	Q	A	A	L	N	A	M	E	A	G	F	D	G	I	E	L	H	A	A	N	G	Y	L	I	N	Q	F	I	D	S	E	A	N	N	R	S	D	E	Y	G	G	S	L	E	N	R	L	R	F
Template Known Secondary structure				S	S	S	S																																		T	T		S								T	T	S							S	G	G	G					S	T	T	S	S	S					T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.						.																																																					.	.	.	.
Template Conservation													.	.	.	.	.	.	.						.																																																					.	.	.	.
Template Sequence		L	D	E	V	V	A	A	L	V	D	A	.	.	.	.	.	.	.	I	G	A	E	R	.	V	G	V	R	L	A	P	L	T	T	L	N	G	T	V	D	A	D	P	I	L	T	Y	T	A	A	A	A	L	L	N	K	H	R	I	V	Y	L	H	I	A	E	V	D	W	D	D	A	P	D	T	P	.	.	.	.
Template Known Secondary structure													.	.	.	.	.	.	.			G	G	G	.							S	S			T	T	S				S	S																T		S								B	T	T	B						.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.						.																																																					.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V
Query Conservation
Alig confidence		.												.	.	.	.	.	.	.	.	.							.			.
Template Conservation		.												.	.	.	.	.	.	.	.	.							.			.
Template Sequence		.	V	S	F	K	R	A	L	R	E	A	Y	.	.	.	.	.	.	.	.	.	Q	G	V	L	I	Y	.	A	G	.	R	Y	N	A	E	K	A	E	Q	A	I	N	D	G	L	A
Template Known Secondary structure		.												.	.	.	.	.	.	.	.	.		S					.		S	.	S												T	T	S
Template Predicted Secondary structure		.												.	.	.	.	.	.	.	.	.							.			.
Template SS confidence
			282	.	.	.	.	.	.	.	290	.	.										.	.	.	.	.	.		.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions