Job Description P0AB71 Confidence 95.37% Date Thu Jan 5 11:14:46 GMT 2012 Rank 66 Aligned Residues 195 % Identity 18% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	D	S	I	N	A	V	L	E	T	A	A	K	V	K	A	P	V	I	V	Q	F	S	N	G	G	A	S	F	I	A	G	K	G	V	K	S	D	V	P	Q	G	A	A	I	L	G	A	I	S	G	A	H	H	V	H	Q	M	A	E	H	Y	G	V	P	V	I	L	H	T	D	H	C	A	K	K	L	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Sequence		I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P	N	.	.	.	.	.	.
Template Known Secondary structure																	T	T		S								S		T	T	T		G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S				T	T	S								S	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	I	D	G	L	L	D	A	G	E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	.	.	.	.	.	.	.	.	.	.	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	I	E	L	G	C	T	G	G	E	E	D	G	V	D
Query Conservation																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	K	G	F	E	A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T	T										S										S	S																			T	T										T	T		B	T	T	T	B	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																																						.
Template SS confidence
												84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	H	M	D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	.	Q	Q	M	G	C	Y	E	V	S	L	G	.	.	.	.	.	.	.	.	.	D	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	.	.	.	.	P	R	E	R	L	A	G	H	F	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.															.			T	T		S						.	.	.	.	.	.	.	.	.		S	S	S															T	T	T	S	.	.	.	.		G	G	G						B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
											153	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.
		268			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		S	.	.	G	S	T	A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	V	F	D
Template Known Secondary structure			T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions