Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB71
Confidence94.10%DateThu Jan 5 11:14:46 GMT 2012
Rank78Aligned Residues114
% Identity20%Templatec2e77B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  TQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKD
Query Conservation 
 



      

  



 






 

 

     
    
 

   
          











 
 
  
Alig confidence 





.....














...






















.......
















.


Template Conservation      

.....  
   


 
 


...



 

        
  
  

.......   
 

 




 
 
.
 
Template Sequence  QHPEDA. . . . . DMAIKRGASGIWVSN. . . HGARQLYEAPGSFDTLPAIAERV. . . . . . . NKRVPIVFDSGVRRGEH. VAK
Template Known Secondary structure 
S.....TT
S

...GGGTSSSS


.......TTSS

SS

S.
Template Predicted Secondary structure 

.....





...











.......








.
Template SS confidence 















































































   1244..... 1250.........1260.... .....1270.........1280....... ..1290.........1300.... ...
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAID
Query Conservation 

  

 



 


  
   


                       

   


  
     

   
       

 
Alig confidence 

























...............................






















Template Conservation 








 


  
  

  
  
...............................
   
  
  

   
   
   
Template Sequence  ALASGADVVALGRPVLFGLALGGWQG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYSVLDYFQKDLTRVMQLTGSQN
Template Known Secondary structure  TT
S
...............................T
SB
Template Predicted Secondary structure 






...............................



Template SS confidence 















































































   1308.1310.........1320.........1330... ......1340.........1350......
 
   358
Predicted Secondary structure 
Query SS confidence 
Query Sequence  V
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   1357
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions