Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB71
Confidence93.10%DateThu Jan 5 11:14:46 GMT 2012
Rank86Aligned Residues112
% Identity17%Templatec2a7nA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l(+)-mandelate dehydrogenase; PDBTitle: crystal structure of the g81a mutant of the active chimera of (s)-2 mandelate dehydrogenase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  TQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKD
Query Conservation 
 



      

  



 






 

 

     
    
 

   
          











 
 
  
Alig confidence 





.....














...






















.........















.

Template Conservation      

.....  
   


 
 


...



 

    
   
 

    .........   

 




 
 

. 
Template Sequence  LSAEDA. . . . . DRCIAEGADGVILSN. . . HGGRQLDCAISPMEVLAQSVAKT. . . . . . . . . GKPVLIDSGFRRGSDI. VK
Template Known Secondary structure 
S.....TT
S

...GGGTS
TT


GGGS.........
S

SS

S.
Template Predicted Secondary structure 

.....





...











.........







.
Template SS confidence 















































































   234..... 240.........250.... .....260.........270....... ..280.........290... ..
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAID
Query Conservation 

  

 



 


  
   


                       

   


  
     

   
       

 
Alig confidence 

























...............................






















Template Conservation 








 



 
  

  
  
...............................
   
  
  

   
 
 
   
Template Sequence  ALALGAEAVLLGRATLYGLAARGETG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDEVLTLLKADIDRTLAQIGCPD
Template Known Secondary structure  TT
S
S...............................T

B
Template Predicted Secondary structure 





...............................



Template SS confidence 















































































   296...300.........310.........320. ........330.........340....
 
   358
Predicted Secondary structure 
Query SS confidence 
Query Sequence  V
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  I
Template Known Secondary structure  G
Template Predicted Secondary structure 
Template SS confidence 
   345
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions