Job Description P0AB71 Confidence 42.31% Date Thu Jan 5 11:14:46 GMT 2012 Rank 247 Aligned Residues 158 % Identity 16% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		E	K	H	F	A	A	T	G	K	P	L	F	S	S	H	M	I	D	L	S	E	E	S	L	Q	E	N	I	E	I	C	S	K	Y	L	E	R	M	S	K	I	G	M	T	L	E	.	.	.	.	.	.	.	.	.	.	.	I	E	L	G	C	T	G	G	E	E	D	G	V	D	N	S	.	.	.	.	.	H	M
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I	R	A	R	F	P	H	L
Template Known Secondary structure										G	G	G		S							T	T	S															T	T			G	G	G					S							T	T	T								T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	A	L	Y	T	Q	P	E	D	V	D	Y	A	Y	T	E	L	S	K	I	S	P	R	F	T	I	A	A	S	F	G	N	V	H	G	V	Y	K	P	G	N	V	V	L	T	P	T	I	L	R	D	S	Q	E	Y	V	S	K	K	H	N	L	P	H	N	S	L	N	F	V	F	H	G	G	S	G	S	T
Query Conservation
Alig confidence														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.										.	.
Template Conservation														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		H	I	G	R	S	V	H	S	L	E	E	A	.	.	.	.	.	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	.	.	.	.	.	.	.	.	.	.	.	H	V	F	R	G	V	S	L	L	S	D	I	K	Q	R	I	.	.	.	.	.	.	.	.	.	S	I	P	V	I	A	I	G	G	.	.	M	T
Template Known Secondary structure									S					.	.	.	.	.						T	T		S						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.		S						S	S	.	.
Template Predicted Secondary structure														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.			.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	I	K	D	S	V	S	Y	G	V	V	K	M	N	I	D	T	D	T	Q	W	A	T	W	E	G	V	L	N	Y	Y	K	A	N	E	A	Y	L	Q	G	Q	L	G	N	P	K	G	E	D	Q	P	N	K	K	Y	Y	D	P	R	V	W	L	R	A	G	Q	T	S	M	I	A	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M
Template Known Secondary structure		G	G	G							T	T		S					S					T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																																		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions