 |
Job Description | P15770 | Confidence | 97.17% | Date | Thu Jan 5 11:34:55 GMT 2012 |
Rank | 319 | Aligned Residues | 108 |
% Identity | 19% | Template | d1sc6a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 2.09 |
|
 |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | I | R | P | G | L | R | I | L | L | I | G | A | G | G | A | S | R | G | V | L | L | P | L | L | S | L | D | C | A | V | T | I | T | N | R | T | V | S | R | A | E | E | L | A | K | L | F | A | H | T | G | S | I | Q | A | L | S | M | D | E | L | E | G | H | E | F | D | L | I | I | N | A | T | S | S | G | I | S |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |
Template Sequence |   |
S | F | E | A | R | G | K | K | L | G | I | I | G | Y | G | H | I | G | T | Q | L | G | I | L | A | E | S | L | G | X | Y | V | Y | F | Y | D | I | E | N | K | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | L | G | N | A | T | Q | V | Q | H | L | S | D | L | L | N | X | S | D | V | V | S | L | H | V | P | E | N | P | S |
Template Known Secondary structure |   |
|
|
| S | T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|
| . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |
| S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
| S | S | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
194 | . | . | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | I | P | A | I | P | S | S | L | . |
. |
I | H | P | G | I | Y | C | Y | D | M | F | Y | Q | K | . |
G | K | T | P | F | L | A | W | C | E | Q | R | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . |
|   |   |   |   |   |
|   |
|   |
|
|   |
| . |   |   |
|   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
T | K | N | X | X | G | A | K | E | I | S | L | X | K | P | G | S | L | L | I | N | A | S | R | G | T | V | V | D | I | P | A | L | A | D | A | L | A | S | K |
Template Known Secondary structure |   |
T | T | T |
| B |
|  |  |  |  |  |  | S |
| T | T |  |  |  |  |  |
| S |
| S | S | S | B |
|  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|