Job Description P15770 Confidence 100.00% Date Thu Jan 5 11:34:55 GMT 2012 Rank 12 Aligned Residues 263 % Identity 28% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	Y	A	V	F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	I	G	L	I	A	T	P	I	R	H	S	L	S	P	T	M	H	N	E	A	F	A	K	L	G	L	D	Y	V	Y	L	A	F	E	V	G	D	K	E	L	K	D	V	V	Q	G	F	R	A	M	N	L	R	G	W	N	V	S	M	P	N	K	T	N	I	H	K	Y	L	D	K	L	S	P	A	A	E	L
Template Known Secondary structure									S	S		T	T		S													T																									T	T								T	T	S	T	T	T	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.				.	.	.	.	.	.
Predicted Secondary structure																																																																.									.	.	.
Query SS confidence																																																																.									.	.	.
Query Sequence		A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	.	A	V	T	I	T	N	R	T	.	.	.	V	S	R	A	E	E
Query Conservation																																																																.									.	.	.
Alig confidence											.																																																					.									.	.	.
Template Conservation											.
Template Sequence		V	G	A	V	N	T	V	V	N	.	D	D	G	V	L	T	G	H	I	T	D	G	T	G	Y	M	R	A	L	K	E	A	G	H	D	I	I	G	K	K	M	T	I	C	G	A	G	G	A	A	T	A	I	C	I	Q	A	A	L	D	G	V	K	E	I	S	I	F	N	R	K	D	D	F	Y	A	N	A	E	K
Template Known Secondary structure			T			S					.		T	T																			T	T				T	T	S								S														T										S	S	T	T
Template Predicted Secondary structure											.
Template SS confidence
		94	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.																				.	.	.
Query SS confidence																						.	.	.	.	.	.	.																				.	.	.
Query Sequence		L	A	K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	E	L	E	.	.	.	.	.	.	.	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	.	.	.	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E
Query Conservation																						.	.	.	.	.	.	.																				.	.	.
Alig confidence																						.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		T	V	E	K	I	N	S	K	T	D	C	K	A	Q	L	F	D	I	E	D	H	E	Q	L	R	K	E	I	A	E	S	V	I	F	T	N	A	T	G	V	G	M	K	P	F	E	G	E	T	L	L	P	S	A	D	M	L	R	P	E	L	I	V	S	D	V	V	Y	K	P	T	K	T	R	L	L	E	I	A	E
Template Known Secondary structure										S	S								T	T											T		S						S	S	T	T	S	T	T	S	T	T			S				G	G	G			T	T						S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	G	S	K	R	N	A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q	L
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		E	Q	G	C	.	Q	T	L	N	G	L	G	M	M	L	W	Q	G	A	K	A	F	E	I	W	T	H	K	E	M	P	V	D	Y	I	K	E	I	L
Template Known Secondary structure			T	T		.					T																	S	S
Template Predicted Secondary structure						.
Template SS confidence
		253	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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