|   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
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|
|
|
|
|
|
|
|
|
| . |
|
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|
| . |
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|
| . |
. |
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|
Query Sequence |   |
Q | F | A | Q | Q | L | N | I | E | H | P | Y | G | R | V | L | . |
A | P | I | N | D | F | I | N | T | L | N | A | F | F | . |
S | A | G | G | K | G | A | N | V | T | V | P | F | K | E | E | A | . |
. |
F | A | R | A | D | E | L | T | E | R | A | A | L | A | G | A | V | N | T | L | M | R | L | E | D | G | R | L | L |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   | . |
|   |   |   |   |
|   |   |   |   |   |   |
|   | . |   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
| . | . |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
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|
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|
|   |   |   |   |
|   |
|   |
Alig confidence |   |
|
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|
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|
|
|
|
|
|
| . |
|
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|
| . |
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|
| . | . |
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . |
|
|
Template Conservation |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
| . | . |
|
|
Template Sequence |   |
R | R | G | K | K | I | G | I | A | V | D | L | E | K | Y | D | D | I | S | M | K | D | L | L | K | R | I | D | D | L | A | K | D | P | Q | I | N | G | I | M | I | E | N | P | L | P | K | G | F | D | Y | Y | E | I | V | R | N | I | P | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | K | D | . |
. |
V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |
| S |
|
|
| T | T |
|
|  |  |  |  | G | G | G | S |
| G | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | B | . | . | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . |
|
|
Template SS confidence |   |
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  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
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|
|
110 | . | . | |
|
. | . |
  |
  |   |
98 | . | 100 | . | . | . | . | |
|
|
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|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
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|
|
|
|
|  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
| . |
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|
Query Sequence |   |
G | D | N | T | D | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | L | S | D | L | E | R | L | S | F | I | R | P | G | L | R | I | L | L | I | G | A | G | G | A | . |
S | R | G | V | L | L | P | L | L | S | L | D | C | A | V | T | I | T | N | R | T | V | S | R | A | E | E | L | A | K |
Query Conservation |   |
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
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|
| . | . |
|
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|
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|
| . |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |   | . | . |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|   |
|
|   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
A | L | S | P | Y | N | Q | G | L | I | A | L | N | R | E | F | L | V | P | A | T | P | R | A | V | I | D | I | M | D | Y | Y | G | . |
. |
Y | H | E | N | T | V | T | I | V | N | R | S | P | V | V | G | R | P | L | S | M | M | L | L | N | R | N | Y | T | V | S | V | C | H | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . |
|
| S |
|  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |
|
|
|
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|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
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|
|
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|
|
|
|
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|
|
|
|
|
|
Query Sequence |   |
L | F | A | H | T | G | S | I | Q | A | L | S | M | D | E | L | E | G | H | E | F | D | L | I | I | N | A | T | S | S | G | I | S | G | D | I | P | A | I | P | S | S | L | I | H | P | G | I | Y | C | Y | D | M | F | Y | Q | K | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
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| . | . | . | . | . |
|
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|
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|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
| . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | K | D | I | G | S | M | T | R | S | S | K | I | V | V | V | A | V | G | . |
. |
. |
. |
. |
R | P | G | F | L | N | R | E | M | V | T | P | G | S | V | V | I | D | V | G | I | N | Y | V | N |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |  |  |  | S | S |  |  |  |  |
|
|
| . | . | . | . | . |
| T | T |
| B |
| G | G | G |
|
| T | T |
|  |  |  |  |
|
|
|  |  | S | S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
|
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|
|
|
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|
|
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |