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Job DescriptionP15770
Confidence100.00%DateThu Jan 5 11:34:55 GMT 2012
Rank11Aligned Residues253
% Identity28%Templatec3fbtB_
PDB info PDB header:oxidoreductase, lyaseChain: B: PDB Molecule:chorismate mutase and shikimate 5-dehydrogenase PDBTitle: crystal structure of a chorismate mutase/shikimate 5-2 dehydrogenase fusion protein from clostridium3 acetobutylicum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL
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Template Sequence  SIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEISEKARK
Template Known Secondary structure  SS



TT



GGGTT
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TTGGGGG
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   82.......90.........100.........110.........120.........130.........140... ......150.........160
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Query Sequence  AGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC. AVTITNRTVSRAEELAK
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Template Sequence  IGAVNTLKFSREG. ISGFNTDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEK. . . . . .
Template Known Secondary structure  T


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   179180.........190. ........200.........210.........220.........230.........240.........250.
 
   161........170.........180.........190...... ...200.........210.........220.........230........
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Query Sequence  LFAHTGSIQALSMDELEGHEFDLIINATSSGISGDI. . PAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGL
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Template Sequence  . . . . . . EFKVISYDELSNLKGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLFLKYARESGV. KAVNGL
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   258.260.........270.........280.........290.........300.........310.........320.... .....330
 
   239240.........250.........260........
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Query Sequence  GMLVAQAAHAFLLWHGVLPDVEPVIKQLQE
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Template Sequence  YMLVSQAAASEEIWNDISIDEIIVDEIFEV
Template Known Secondary structure  T



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   331........340.........350.........360
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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