Job Description P15770 Confidence 97.65% Date Thu Jan 5 11:34:55 GMT 2012 Rank 156 Aligned Residues 128 % Identity 12% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	.	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	E	L
Query Conservation																																								.
Alig confidence																																								.																											.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		G	D	P	E	T	F	N	R	V	H	L	E	I	G	K	S	A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	.	.	.	.	.	G	A	E	R	V	D	S	L	E	E
Template Known Secondary structure															T	T	T				S	T	T	S								S													T	T									S	S											.	.	.	.	.	T					S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																													.	.																.
Query SS confidence																													.	.																.
Query Sequence		E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	.	.	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	.	K	T	P	F	L	A	W	C	E	Q	R	G
Query Conservation																													.	.																.
Alig confidence																													.	.																.
Template Conservation
Template Sequence		L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G
Template Known Secondary structure							S									S	G	G	G	T	T		B								S		T	T							S		G	G	G	B											T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions