Job Description P15770 Confidence 100.00% Date Thu Jan 5 11:34:55 GMT 2012 Rank 7 Aligned Residues 259 % Identity 31% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	Y	A	V	F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Y	G	V	I	G	F	P	V	K	H	S	L	S	P	V	F	Q	N	A	L	I	R	Y	A	G	L	N	A	V	Y	L	A	F	E	I	N	P	E	E	L	K	K	A	F	E	G	F	K	A	L	K	V	K	G	I	N	V	T	V	P	F	K	E	E	I	I	P	L	L	D	Y	V	E	D	T	A	K	E
Template Known Secondary structure									S	S		T	T		S													T		S										G	G	G											T	T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		I	G	A	V	N	T	V	K	F	.	E	N	G	K	A	Y	G	Y	N	T	D	W	I	G	F	L	K	S	L	K	S	L	I	P	E	V	K	E	K	S	I	L	V	L	G	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	K	V	F	L	W	N	R	T	K	E	K	A	I	K	L	A	Q	K
Template Known Secondary structure			T								.		T	T																	T	T	T		S			T	T									S													T	T								S	S
Template Predicted Secondary structure											.
Template SS confidence
		87	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		F	A	H	T	G	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	.	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G	M
Query Conservation																																					.
Alig confidence			.	.	.	.																															.																						.	.													.
Template Conservation			.	.	.	.																																																					.	.													.
Template Sequence		F	.	.	.	.	P	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N	T	T	S	V	G	L	K	D	E	D	P	E	I	F	N	Y	D	L	I	K	K	D	H	V	V	V	D	I	I	Y	K	E	.	.	T	K	L	L	K	K	A	K	E	K	G	A	.	K	L	L	D	G	L	P	M
Template Known Secondary structure		S	.	.	.	.						S		G	G	G	T	G	G	G		S						S	S	T	T	S	S	T	T				S	S		G	G	G			T	T							S	S	S		.	.										T	T		.					S
Template Predicted Secondary structure			.	.	.	.																																																					.	.													.
Template SS confidence
		166					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	W	Q	G	I	E	A	F	K	I	W	N	G	C	E	V	P	Y	S	V	A	E	R	S	V	R	D
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions