Return to main results Retrieve Phyre Job Id

Job DescriptionP15770
Confidence97.14%DateThu Jan 5 11:34:55 GMT 2012
Rank329Aligned Residues85
% Identity14%Templatec2fnzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140... ......150.........160..... ....170.........180.........
Predicted Secondary structure 









.



......













Query SS confidence 


























.





















. . . . . .























Query Sequence  RPGLRILLIGAGGASRGVLLPLLSLDC. AVTITNRTVSRAEELAKLFAHT. . . . . . GSIQALSMDELEGHEFDLIINATS
Query Conservation    

 












   
   
 . 
 
 

   

  

      ......                







Alig confidence 


























.





















......























Template Conservation      

 




 

   
  
    
 

 
 
           

                 
  

  





 

Template Sequence  IERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTNDYADISGSDVVIITAS
Template Known Secondary structure 





ST
S
SSSST






GGGGTT
S


Template Predicted Secondary structure 


























Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   190.........200.
Predicted Secondary structure 










Query SS confidence 











Query Sequence  SGISGDIPAIPS
Query Conservation   
          
Alig confidence 











Template Conservation          
   
Template Sequence  IPGRPKDDRSEL
Template Known Secondary structure 
SS

SS
GGGG
Template Predicted Secondary structure 






Template SS confidence 











   100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions