Job Description P15770 Confidence 100.00% Date Thu Jan 5 11:34:55 GMT 2012 Rank 10 Aligned Residues 268 % Identity 36% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		M	E	T	.	Y	A	V	F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		M	E	K	V	Y	G	L	I	G	F	P	V	E	H	S	L	S	P	L	M	H	N	D	A	F	A	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	I	P	F	L	D	E	V	D	E	H	A
Template Known Secondary structure											S	S		T	T		S												T	T												T	T													T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																															.
Query SS confidence																																				.																															.
Query Sequence		A	L	A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	.	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	.	A	V	T	I	T	N	R	T	V	S	R	A	E	E
Query Conservation																																				.																															.
Alig confidence													.																							.																															.
Template Conservation													.
Template Sequence		R	R	I	G	A	V	N	T	I	I	N	.	N	D	G	R	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	T	L	D	G	K	R	I	L	V	I	G	A	G	G	G	A	R	G	I	Y	F	S	L	L	S	T	A	A	E	R	I	D	M	A	N	R	T	V	E	K	A	E	R
Template Known Secondary structure					T								.		T	T																				T	T				T	T									S												T	T	T		S							S	S
Template Predicted Secondary structure													.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		158	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure											.																															.	.
Query SS confidence											.																															.	.
Query Sequence		L	A	K	L	F	A	H	T	G	.	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	.	.	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N
Query Conservation											.																															.	.
Alig confidence											.																															.	.																																				.
Template Conservation																																																																															.
Template Sequence		L	V	R	E	G	D	E	R	R	S	A	Y	F	S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T	S	V	G	M	H	P	R	V	E	V	Q	P	L	S	L	E	R	L	R	P	G	V	I	V	S	D	I	I	Y	N	P	L	E	T	K	W	L	K	E	A	K	A	R	G	A	.	R	V
Template Known Secondary structure						S		S	S	S												T	G	G	G		S						S		T	T		S	S			S			S	S			T	T			T	T									S	S	S	S										T	T		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	G	V	G	M	L	V	Y	Q	G	A	L	A	F	E	K	W	T	G	Q	W	P	D	V	N	R	M	K	Q	L	V	I	E	A	L
Template Known Secondary structure				S																	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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