Job Description P15770 Confidence 96.55% Date Thu Jan 5 11:34:55 GMT 2012 Rank 437 Aligned Residues 163 % Identity 15% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.																				150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	.	V	T	I	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	V	S	R	A	E	E	L	A	K	L	F
Query Conservation																																												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	T	R	E	M	A	K	K	L	W	G	G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P	A	L	V	E	L	F	T
Template Known Secondary structure														S			T	T									S												T	T	T									S	S						T	T				T						T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	T	G	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G	M	L	V
Query Conservation
Alig confidence																											.	.	.															.																											.
Template Conservation																											.	.	.															.																											.
Template Sequence		T	K	D	N	A	E	F	V	K	N	P	D	A	I	F	K	L	D	V	D	I	F	V	P	A	.	.	.	A	I	E	N	V	I	R	G	D	N	A	G	L	V	.	K	A	R	L	V	V	E	G	A	N	G	P	T	T	P	E	A	E	R	I	L	Y	E	R	G	V	.	V	V	V	P	D	I	L	A	N	A
Template Known Secondary structure			T	S						S	S	T	T	G	G	G	G				S						.	.	.	S		S	S		B		T	T	T	T	T	T		.			S						S	S	S		B										T	T	T		.									S	T
Template Predicted Secondary structure																											.	.	.															.																											.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		A	Q	A	A	H	A	F	L	L	W	H	.	.	.	.	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E	E	L
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		G	G	V	I	M	S	Y	L	E	W	V	E	N	L	Q	W	Y	I	W	D	E	E	E	T	R	K	R	L	E	N	I	M
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions