Job Description P15770 Confidence 100.00% Date Thu Jan 5 11:34:55 GMT 2012 Rank 5 Aligned Residues 267 % Identity 31% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	Y	A	V	F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	I	G	L	I	G	H	P	V	E	H	S	F	S	P	I	M	H	N	A	A	F	K	D	K	G	L	N	Y	V	Y	V	A	F	D	V	L	P	E	N	L	K	Y	V	I	D	G	A	K	A	L	G	I	V	G	F	N	V	T	I	P	H	K	I	E	I	M	K	Y	L	D	E	I	D	K	D	A	Q	L
Template Known Secondary structure									S	S		T	T		S												T	T												G	G	G	G	G	G									T								T	T	S	T	T	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L
Query Conservation
Alig confidence											.																																																				.
Template Conservation											.																																																				.
Template Sequence		I	G	A	V	N	T	I	K	I	.	E	D	G	K	A	I	G	Y	N	T	D	G	I	G	A	R	M	A	L	E	E	E	I	G	R	V	K	D	K	N	I	V	I	Y	G	A	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	.	N	I	I	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E
Template Known Secondary structure			T								.		T	T																									S									S											T	S	S	S	.							S	S
Template Predicted Secondary structure											.																																																				.
Template SS confidence
		92	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure									.	.	.	.	.																													.	.	.
Query SS confidence									.	.	.	.	.																													.	.	.
Query Sequence		F	A	H	T	G	S	I	.	.	.	.	.	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	.	.	.	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R
Query Conservation									.	.	.	.	.																													.	.	.
Alig confidence									.	.	.	.	.																													.	.	.																																				.
Template Conservation																																																																																.
Template Sequence		I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	G	V	D	I	I	I	N	A	T	P	I	G	M	Y	P	N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V	V	M	D	L	I	Y	N	P	L	E	T	V	L	L	K	E	A	K	K	V	N	A	.	K
Template Known Secondary structure							T												T	T				T	T								S		T	T		T	T			S	S			S	S		S	T	T			S	S	S								S	S	S	S									T	T	T		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E	E	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	N	G	L	G	M	L	I	Y	Q	G	A	V	A	F	K	I	W	T	G	V	E	P	N	I	E	V	M	K	N	A	I	I	D	K	I	T
Template Known Secondary structure					T																	S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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