Job Description P15770 Confidence 100.00% Date Thu Jan 5 11:34:55 GMT 2012 Rank 28 Aligned Residues 255 % Identity 13% Template c1luaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.	.	.	.																								.	.
Query SS confidence																					.	.	.	.	.																								.	.
Query Sequence		N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	.	.	.	.	.	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	.	.	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L
Query Conservation																					.	.	.	.	.																								.	.
Alig confidence																					.	.	.	.	.																								.	.
Template Conservation
Template Sequence		K	K	L	L	F	Q	F	D	T	D	A	T	P	S	V	F	D	V	V	V	G	Y	D	G	G	A	D	H	I	T	G	Y	G	N	V	T	P	D	N	V	G	A	Y	V	D	G	T	I	Y	T	R	G	G	K	E	K	Q	S	T	A	I	F	V	G	G	G	D	M	A	A	G	E	R	V	F	E	A	V	K	K
Template Known Secondary structure										S	S	S	S												T	T		S						S	S			T	T	T										S	S			G	G	G	G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.														.
Query SS confidence																																		.														.
Query Sequence		A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	.	S	F	I	R	P	G	L	R	I	L	L	I	G	.	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A
Query Conservation																																		.														.
Alig confidence											.																							.														.
Template Conservation											.
Template Sequence		R	F	F	G	P	F	R	V	S	.	C	M	L	D	S	N	G	S	N	T	T	A	A	A	G	V	A	L	V	V	K	A	A	G	G	S	V	K	G	K	K	A	V	V	L	A	G	T	G	P	V	G	M	R	S	A	A	L	L	A	G	E	G	A	E	V	V	L	C	G	R	K	L	D	K	A	Q	A	A	A
Template Known Secondary structure				B	T	T	B				.					G	G	G																T	T	S			T	T							T	T	T	S													T	T								S	S
Template Predicted Secondary structure											.
Template SS confidence
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	.	.	.	.	.	.	.	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																							.																							.	.
Template Conservation																																														.																							.	.
Template Sequence		D	S	V	N	K	R	F	K	V	N	V	T	A	A	E	T	A	D	D	A	S	R	A	E	A	V	K	G	A	H	F	V	F	T	A	G	A	I	G	L	E	L	L	P	.	Q	A	A	W	Q	N	E	S	S	I	E	I	V	A	D	Y	N	A	Q	P	P	L	.	.	G	I	G	G	I	D	A	T	D	K	G
Template Known Secondary structure									T										S								T	T	T		S								T	T				B		.						T		T	T										S	S	S		.	.	S	B	T	T			T	T
Template Predicted Secondary structure																																														.																							.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.
		233	.	.												.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		R	N	A	.	.	.	.	.	.	.	.	.	.	.	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	.	.	D	V	E	P	V	I	K	Q	L	Q	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.														.									.	.
Template Conservation																													.
Template Sequence		K	E	Y	G	G	K	R	A	F	G	A	L	G	I	G	G	L	K	L	K	L	H	R	A	C	I	A	.	K	L	F	E	S	S	E	G	V	F	D	A	E	E	I	Y	K	L	A	K	E
Template Known Secondary structure					T	T																							.			T	S		S					S
Template Predicted Secondary structure																													.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions