Job Description P15770 Confidence 96.55% Date Thu Jan 5 11:34:55 GMT 2012 Rank 436 Aligned Residues 163 % Identity 12% Template c1bvuF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.		.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.
Predicted Secondary structure																																									.				.							.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																									.				.							.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	.	D	C	A	.	V	T	I	T	N	R	.	.	.	.	.	.	.	.	.	.	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	.	.	.	S
Query Conservation																																									.				.							.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																																									.				.							.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		S	Y	T	V	R	E	A	A	K	A	L	G	M	D	L	K	G	K	T	I	A	I	Q	G	Y	G	N	A	G	Y	Y	M	A	K	I	M	S	E	E	Y	G	M	K	V	V	A	V	S	D	T	K	G	G	I	Y	N	P	D	G	L	N	A	D	E	V	L	A	W	K	K	K	T	G	S	V	K	D	F	P	G
Template Known Secondary structure												T	T				T	T									S													T	T										T	T						T	T															S	S	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G	M	L	V	A	Q	A	A	H
Query Conservation
Alig confidence																																				.	.	.	.																											.
Template Conservation																																				.	.	.	.																											.
Template Sequence		A	T	N	I	T	N	E	E	L	L	E	L	E	V	D	V	L	A	P	S	A	I	E	E	V	I	T	K	K	N	A	D	N	I	.	.	.	.	K	A	K	I	V	A	E	L	A	N	G	P	T	T	P	E	A	D	E	I	L	Y	E	K	G	I	.	L	I	I	P	D	F	L	C	N	A	G	G	V	T	V
Template Known Secondary structure		S										T	S			S						S		S	S		B						T	T		.	.	.	.			S						S	S			B											T	T		.									T
Template Predicted Secondary structure																																				.	.	.	.																											.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		A	F	L	L	W	H	G	.	.	.	.	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E	E	L
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		S	Y	F	E	W	V	Q	N	I	T	G	D	Y	W	T	V	E	E	T	R	A	K	L	D	K	K	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions