Job Description P0ACM9 Confidence 100.00% Date Thu Jan 5 11:18:34 GMT 2012 Rank 2 Aligned Residues 219 % Identity 13% Template c3edpB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262 Resolution 2.09 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	T	V	E	N	A	K	E	K	L	D	R	W	L	K	D	G	I	T	T	P	G	G	K	L	P	S	E	R	E	L	G	E	L	L	G	I	K	R	M	T	L	R	Q	A	L	L	N	L	E	A	E	S	K	I	F	R	K	D	R	K	G	W	F	V	T	Q	P	R	F	N	Y	S	P	E	L	S	A	S
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		K	P	L	F	E	V	I	A	S	K	I	K	D	S	I	N	R	D	E	Y	K	T	G	.	.	X	P	N	E	T	A	L	Q	E	I	Y	S	S	S	R	T	T	I	R	R	A	V	D	L	L	V	E	E	G	L	V	V	R	K	N	G	V	G	L	Y	V	Q	P	K	L	T	A	Q	N	I	L	E	X	T	G
Template Known Secondary structure																		T	T	S	S				.	.											T	T																T	T	S					T	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	R	A	A	I	E	Q	G	R	E	P	S	W	G	F	T	E	K	N	R	T	S	D	I	P	E	T	L	A	P	L	I	A	V	T	P	S	T	E	L	Y	R	I	T	G	W	G	A	L	E	G	H	K	V	F	Y	H	E	T	Y	I	N	P	E	V	A	P	G	F	I	E	Q	L	E	N	H	S	F	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation			.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	X	L	K	K	D	I	K	D	F	Y	I	R	K	A	G	K	F	Y	A	E	I	F	G	X	K	E	N	E	L	V	Y	S	I	K	F	V	Q	K	.	S	E	H	G	A	T	L	D	R	L	I	L	P	L	G	L	Y	P	D	L	Q	A	K	D	F	Q	I	I	N	I
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.																							T	S		T	T	S											.		T	T											G	G	G	S	T	T			G	G	G				S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		85											.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	W	E	K	C	Y	Q	K	E	T	V	V	K	K	L	I	F	K	P	V	R	M	P	G	D	I	S	K	Y	L	G	G	S	A	G	M	P	A	I	L	I	E	K	H	R	A	D	Q	Q	G	N	I	V	Q	I	D	I	E	Y	W	R	F	E	A	V	D	L	I	I	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	V	N	S	G	K	Y	K	L	F	E	L	E	Q	E	L	Q	L	I	L	A	G	N	E	Q	I	K	N	X	H	L	N	E	N	D	P	V	F	K	L	S	S	V	F	Y	A	E	N	D	X	P	I	A	I	Q	Y	H	Y	E	D	A	E	S	T	K	Y	V	V	D	F
Template Known Secondary structure						T	T	S	S	S																										T	T													T	T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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