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Job DescriptionP0ACM9
Confidence100.00%DateThu Jan 5 11:18:34 GMT 2012
Rank5Aligned Residues216
% Identity22%Templatec2wv0H_
PDB info PDB header:transcriptionChain: H: PDB Molecule:hth-type transcriptional repressor yvoa; PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKIFRKDRKGWFVTQPRFNYSPEL
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Template Sequence  QSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYA. . . . . . . . EQRQALSNLVNEGLLYRLTFVSKPKMEQ. . . . ALQG
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   6...10.........20.........30.........40. ........50.........60......... 70...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SASFQRAAIEQGREPSWGFTEKNRTSDIPETLAPLIAVTPSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLENH
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Template Sequence  LTSFTEDMKSRGMTPGSRLIDYQLI. DSTEELAAILS. . . . . . IHKITRVRLANDIPMAIESSHIPFELAGELNESHFQS
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   86...90.........100.........110 .........120. ........130.........140.........150........
 
   162.......170.........180.........190.........200.........210.........220.........230......
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Query Sequence  SFSAVWEKCYQKETVVKKLIFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL
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Template Sequence  SIYDHIERYNSIPISRAKQELEPSAATTEEANILGIQKGAPVLLIKRTTYLQNGTAFEHAKSVYRGDRYTFVHYM
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   165....170.........180.........190.........200.........210.........220.........230.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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