 |
Job Description | P0ACM9 | Confidence | 95.13% | Date | Thu Jan 5 11:18:34 GMT 2012 |
Rank | 109 | Aligned Residues | 46 |
% Identity | 24% | Template | c2dbbA_ |
PDB info |
PDB header:transcriptional regulator | Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; |
PDBTitle: crystal structure of ph0061
|
Resolution | 2.00 Å |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | D | R | W | L | K | D | G | I | T | T | P | G | G | K | L | P | S | E | R | E | L | G | E | L | L | G | I | K | R | M | T | L | R | Q | A | L | L | N | L | E | A | E | S | K | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   | . |   |
|   |   |
|   |
|   | . |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
Template Sequence |   |
D | R | V | D | M | Q | L | V | K | . |
I | L | S | E | N | S | R | L | . |
T | Y | R | E | L | A | D | I | L | N | T | T | R | Q | R | I | A | R | R | I | D | K | L | K | K | L | G | I | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | . |  |  |  |  |
| T | T |
| . |
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|