|   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
E | L | G | V | C | V | V | D | I | G | G | G | T | M | D | I | A | V | Y | T | G | G | A | L | R | . |
. |
H | T | K | V | I | P | Y | A | G | N | V | V | T | S | D | I | A | Y | A | F | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | P | S | D | A | E | A | I | K | V | R | H | G | . |
. |
. |
. |
. |
. |
. |
C | A |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | T | T | G | I | V | L | D | S | G | D | G | V | T | H | N | V | P | I | Y | E | G | Y | A | L | P | H | A | I | M | R | L | D | L | A | G | R | D | L | T | D | Y | L | M | K | I | L | T | E | R | G | Y | S | F | V | T | T | A | E | R | E | I | V | R | D | I | K | E | K | L | C | Y | V | A | L | D | F | E | N | E |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T |  |  |
| G | G | G |
|  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | S | I | V | G | K | D | E | S | V | E | V | P | S | V | G | G | R | P | P | R | S | L | Q | R | Q | T | L | A | E | V | I | E | P | R | Y | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | L | N | L | V | N | E | E | I | L | Q | L | Q | E | K | L | R | Q | Q | G | V | K | H | H | L | A | A | G | I | V | L | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
| . | . | . | . | . |   |   |
|   |   |
|
|
|
|   |
Template Sequence |   |
M | A | T | A | A | S | S | S | S | L | E | K | S | Y | E | L | P | D | G | Q | V | I | T | I | G | N | E | R | F | . |
R | C | P | E | T | L | F | Q | P | S | F | I | G | M | E | S | A | G | I | H | E | T | T | Y | N | S | I | M | K | C | D | I | D | I | R | . |
. |
. |
. |
. |
K | D | L | Y | A | N | N | V | M | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | T | T |
|  |  |  |  |
| T | T | S |
|  |  |  |  | S | T |  |  |  | . |  |  |  |  | T | T | T |
| G | G | G | G | T |
|
| S |
|
|  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  | . | . | . | . | . |  |  |  |  | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  | . |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | A | A | Q | I | E | G | L | A | A | C | A | Q | R | V | F | . |
. |
. |
. |
. |
. |
H | T | Q | V | R | I | G | A | P | L | N | I | T | G | L | T | D | Y | A | Q | E | P | Y | Y | S | T | A | V | G | L | L | H | Y | G | K | E | S | H | L | N | G | E | A | E | V | E | K | R | V | T | A | S | V | G |
Query Conservation |   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   | . |   |   |   |
|
|
|   |
|
|   |
|   |
|
Template Sequence |   |
G | G | T | T | M | Y | P | G | I | A | D | R | M | Q | K | E | I | T | A | L | A | P | S | T | M | K | I | K | I | I | A | P | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | K | Y | S | V | W | I | G | G | S | I | L | A | S | L | S | T | F | Q | . |
Q | M | W | I | T | K | Q | E | Y | D | E | A | G |
Template Known Secondary structure |   |
S | G | G | G |
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|
|
|
|  |  |
|
| T | T | . | . | . | . | . | . | . | . | . | . | T | T | S |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | . | G | G | S |
|
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | |
. | . | . | . | . | . | 360 | . | . | . | . | . | . |
  |