Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABH0
Confidence99.91%DateThu Jan 5 11:15:29 GMT 2012
Rank18Aligned Residues165
% Identity20%Templated1dkgd2
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Actin/HSP70
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210.........220.... .....230.........240.........250. .......
Predicted Secondary structure 








.....



...................
Query SS confidence 





















. . . . .


























. . . . . . . . . . . . . . . . . . .






Query Sequence  ELGVCVVDIGGGTMDIAVYTGG. . . . . ALRHTKVIPYAGNVVTSDIAYAFGTPP. . . . . . . . . . . . . . . . . . . SDAEAIK
Query Conservation     
 




  

 
 
    .....          

  

  

  
    ...................  

  
Alig confidence 





















.....


























...................






Template Conservation 

 




 






                     

  

  
                         
    
  
Template Sequence  NRTIAVYDLGGGTFDISIIEIDEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAK
Template Known Secondary structure 
SS




SS
S


STT
Template Predicted Secondary structure 






















Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   259260.........270.........280.........290.........300.........310.........320.........330........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGA
Query Conservation                               

      

      
   
   
      
         
  


 

 
Alig confidence 






















































.......

















Template Conservation    
                          
               
   
     .......        
  
 
 

 
Template Sequence  IELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQ. . . . . . . DAGLSVSDIDDVILVGGQ
Template Known Secondary structure  TTSSSTTS.......TTT

TTT

SGG
Template Predicted Secondary structure 

















.......











Template SS confidence 















































































   271........280.........290.........300.........310.........320..... ....330.........340...
 
   339340.........350.........360.........370.........380......
Predicted Secondary structure 














Query SS confidence 















































Query Sequence  AQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYG
Query Conservation 
 

 
   
       
 
  
            
    
 

    
Alig confidence 



















............















Template Conservation 
  
 
   
   
   
  ............   
  


 


  
Template Sequence  TRMPMVQKKVAEFFGKEPRK. . . . . . . . . . . . DVNPDEAVAIGAAVQG
Template Known Secondary structure  GGSSS

B
............SS
TTTT
Template Predicted Secondary structure 








............


Template SS confidence 















































   344.....350.........360... ......370.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions