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Job DescriptionP0ABH0
Confidence94.40%DateThu Jan 5 11:15:29 GMT 2012
Rank102Aligned Residues296
% Identity14%Templatec3smpA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pantothenate kinase 1; PDBTitle: monoclinic crystal structure of human pantothenate kinase 1 alpha
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  VGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISC
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Template Sequence  FGMDIGGTLVKLVYFEPKDIT. . . . . . . . . . . . . . . . . . . . AEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNL
Template Known Secondary structure 
SSS


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STTT
GGG
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   239240.........250......... 260.........270.........280.........290........
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  QNEIGMVPISEEEVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKN
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Template Sequence  TMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGGAFKF
Template Known Secondary structure  TTGGGTTGGGT
S................................STT
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   299300.........310.........320.........330......... 340......
 
   171........180...... ...190....... ..200.........210.........220.....
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Query Sequence  IVKAVERCGLKVDQLI. FAGLASSYSVL. . . . . . . . . . . . . . . . . . . . . . . . TEDERELGVCVVDIGGGTMDIAVYTGGA
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Template Sequence  EEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCPYPMLLVNMGSGVSILAVYSKDN
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BTTB
SSTT
TTT



SSSSTT
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   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   226...230.........240.........250.........260.........270.........280.........290....
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Query Sequence  LRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLA. . . . . . . . . . .
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Template Sequence  YKRVTGTSLGGGTF. . . . . . . . . . . . . . . . . . . LGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQG
Template Known Secondary structure  S
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GGGTSSS
BGGGTB
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   430.........440... ......450.........460.........470.........480.........490
 
   295....300.........310.........320.........330....... ..340.........350.........
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Query Sequence  . . . . . . . . . . . . . . EVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGG. AAQIEGLAACAQRVFHTQVRIG
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Template Sequence  SAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAM. . . . . . .
Template Known Secondary structure  TSTTGGGGS

T


SGGGTS
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   491........500.........510.........520.........530.........540.........550.........560...
 
   360.........370. ........380....
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Query Sequence  APLNITGLTDYA. QEPYYSTAVGLLH
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Template Sequence  DFWSKGQLKALFLEHEGYFGAVGALL
Template Known Secondary structure  TTTS


BTTTT
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   564.....570.........580.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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