Job Description P0ABH0 Confidence 97.13% Date Thu Jan 5 11:15:29 GMT 2012 Rank 80 Aligned Residues 286 % Identity 13% Template c3r8eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical sugar kinase; PDBTitle: crystal structure of a hypothetical sugar kinase (chu_1875) from2 cytophaga hutchinsonii atcc 33406 at 1.65 a resolution Resolution 1.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	G	L	E	I	G	T	A	K	V	A	A	L	V	G	E	V	L	P	D	G	M	V	N	I	I	G	V	G	S	C	P	S	R	G	M	D	K	G	G	V	N	D	L	E	S	V	V	K	C	V	Q	R	A	I	D	Q	A	E	L	M	A	D	C	Q	I	S	S	V	Y	L	A	L	S	G	K	H	I
Query Conservation
Alig confidence																		.	.																			.	.	.	.	.	.	.																							.												.	.	.
Template Conservation																		.	.																			.	.	.	.	.	.	.																							.												.	.	.
Template Sequence		X	I	L	G	I	D	V	G	G	T	S	V	K	F	G	L	.	.	V	T	P	E	G	E	I	Q	N	A	T	R	F	X	T	A	D	W	.	.	.	.	.	.	.	V	N	G	I	G	F	V	E	S	X	K	L	E	I	G	N	F	L	K	Q	Y	P	.	I	V	K	G	V	G	I	G	W	P	G	.	.	.
Template Known Secondary structure										S	S							.	.			T	T															.	.	.	.	.	.	.		T	T	T																		T	.	T									S	S	.	.	.
Template Predicted Secondary structure																		.	.																			.	.	.	.	.	.	.																							.												.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	Q	N	E	I	G	M	V	P	I	S	E	E	E	V	T	Q	E	D	V	E	N	V	V	H	T	A	K	S	V	R	V	R	D	E	H	R	V	L	H	V	I	P	Q	E	Y	A	I	D	Y	Q	E	G	I	K	N	P	V	G	L	S	G	V	R	M	Q	A	K	V	H	L	I	T	C	H	N	D	M	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	L	D	R	T	K	V	I	L	L	P	N	I	P	S	V	V	N	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S						B	T	T	B					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230											.	.	.	.	.
Predicted Secondary structure															.															.	.																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence															.															.	.																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	V	K	A	V	E	R	C	G	L	K	.	V	D	Q	L	I	F	A	G	L	A	S	S	Y	S	.	.	V	L	T	E	D	E	R	E	L	G	V	C	V	V	D	I	G	G	G	T	M	D	I	A	V	Y	T	G	G	A	L	R	H	T	K	.	.	.	.	.	.	.	.	.	.	V	I	P	Y	A
Query Conservation															.															.	.																																				.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.												.															.	.																				.																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																.
Template Sequence		.	.	I	V	E	I	L	R	S	E	F	P	H	I	H	F	K	I	E	N	D	A	K	C	A	A	L	G	E	Y	Y	F	G	E	N	K	R	X	Q	T	F	I	L	L	A	L	G	T	G	.	V	G	S	G	V	X	X	N	G	K	L	F	I	G	G	R	G	N	G	T	E	V	G	H	X	L	T	T	R	G
Template Known Secondary structure		.	.										T	T	S																			S	T	T	T	T		S	S							S	S	S	.								T	T						T	T	S					G	G	G		B		T	T	S
Template Predicted Secondary structure		.	.																																																.
Template SS confidence
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	V	T	S	D	I	A	Y	A	F	G	T	P	P	S	D	A	E	A	I	K	V	R	H	G	C	A	L	G	S	I	V	G	K	D	E	S	V	E	V	P	S	V	G	G	R	P	P	R	S	L	Q	R	Q	T	L	A	E	V	I	E	P	R	Y	T	E	L	L	N	L	V	N	E	E	I	L	Q	L
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	L	E	N	Q	V	G	I	N	H	L	I	A	Y	T	H	E	Q	L	A	L	D	V	A	K	K	S	S	L	H	T	I	A	E	L	S	P	K	V	I	A	D	H	A	A	Q	G	D	A	.	.	.	.	.	.	.	.	.	.	L	A	L	A	V	W	A	D	I	G	T	I	I	G	E	S	L	V	N	I
Template Known Secondary structure		S	B	S					S																T	T				S	G	G	G		S	S												T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.											.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		Q	E	K	L	R	Q	Q	G	V	K	H	H	L	A	A	G	I	V	L	T	G	G	A	A	Q	I	.	E	G	L	A	A	C	A	Q	R	V	F	H	T	Q	V	R	I	G	A	P	L	N	I	T	G	L	T	D	Y	A	Q	E	P	Y	Y	S	T	A	V	G	L	L	H	Y	G	K	E
Query Conservation																												.
Alig confidence						.	.	.	.	.	.	.	.															.																															.	.
Template Conservation						.	.	.	.	.	.	.	.																																														.	.
Template Sequence		V	R	V	X	.	.	.	.	.	.	.	.	D	L	N	N	I	L	L	G	G	G	I	S	G	A	F	D	Y	F	V	P	N	L	K	K	A	X	L	E	H	L	P	T	Y	Y	T	D	D	X	Y	I	G	K	A	T	L	.	.	E	N	D	A	G	L	L	G	A	A	G	L	I	X	E
Template Known Secondary structure						.	.	.	.	.	.	.	.									S	G	G	G	G	G																S						T	T							S	S	.	.	G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																														.	.
Template SS confidence
		237	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions