Job Description P0ABH0 Confidence 99.23% Date Thu Jan 5 11:15:29 GMT 2012 Rank 48 Aligned Residues 382 % Identity 12% Template c3ifrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																															.																						.	.	.
Query SS confidence																																															.																						.	.	.
Query Sequence		K	L	V	V	G	L	E	I	G	T	A	K	V	A	A	L	V	G	E	V	L	P	D	G	M	V	N	I	I	G	V	G	S	C	P	S	R	G	M	D	K	G	G	V	N	.	D	L	E	S	V	V	K	C	V	Q	R	A	I	D	Q	A	E	L	M	A	D	.	.	.	C	Q	I	S	S	V	Y	L	A	L
Query Conservation																																															.																						.	.	.
Alig confidence																			.	.																											.																						.	.	.
Template Conservation																			.	.
Template Sequence		R	Q	V	I	G	L	D	I	G	T	T	S	T	I	A	I	L	.	.	V	R	L	P	D	T	V	V	A	V	A	S	R	P	T	T	L	S	S	P	H	P	G	W	A	E	E	D	P	A	Q	W	W	D	N	A	R	A	V	L	A	E	L	K	T	T	A	G	E	S	D	W	R	P	G	G	I	C	V	T	G
Template Known Secondary structure											S	S							.	.			T	T	T													B		S	S	T	T																									T	G	G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.																																			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		S	G	K	H	I	S	C	Q	N	E	I	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	I	S	E	E	E	V	T	Q	E	D	V	E	N	V	V	H	T	A	K	S	V	R	V	R	D	E	H	R	V	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																									.	.
Template Conservation																																																							.
Template Sequence		X	L	P	A	V	V	L	L	D	D	R	G	A	V	L	R	P	S	I	Q	Q	S	D	G	R	C	G	D	E	V	A	E	L	R	A	E	V	D	S	E	A	F	L	A	R	T	G	N	G	V	T	Q	Q	.	L	V	T	A	K	L	R	W	I	E	R	H	E	P	A	V	F	G	A	I	A	T	V	C	G	S
Template Known Secondary structure			S	S		B					T	T	S		B		S					T	T			T	T											S										S	S		S	S	T	T	.	S																		T		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																										128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	V	I	P	Q	E	Y	A	I	D	Y	Q	E	G	I	K	N	P	V	G	L	S	G	V	R	M	Q	A	K	V	H	L	I	T	C	H	N	D	M	A	K	N	I	V	K	A	V	E	R	C	G	L	K	V	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		Y	D	Y	I	N	X	L	L	T	G	E	R	V	V	D	R	N	W	A	L	E	G	G	F	I	D	L	A	S	G	T	V	E	A	D	L	V	A	L	A	H	I	P	P	S	A	V	P	P	A	H	P	T	H	R	V	L	G	A	V	T	A	E	.	.	.	.	.	.	.	A	A	A	L	T	G	L	P	T	G
Template Known Secondary structure																								T				T	T	T	T										T	T	S		G	G	G	S						T	T	S									.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.														.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	I	F	A	G	L	A	S	S	Y	S	V	L	T	E	D	E	.	R	E	L	G	V	C	V	V	D	I	G	G	G	T	M	D	I	A	V	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	R	H	T	K	V	I	P	Y	A	G	N	V	V	T	S	D	I	A	Y	A	F	G	T
Query Conservation																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	Y	G	G	A	A	D	H	I	A	S	A	L	A	A	G	I	T	R	P	G	D	V	L	L	K	F	G	G	A	G	D	I	I	V	A	S	A	T	A	K	S	R	L	Y	L	D	Y	H	L	V	P	G	L	Y	A	P	N	G	C	X	A	A	T	G	S	A	L	N	W	L	A	K	L	L	A	P	E
Template Known Secondary structure																		T	T			S	T	T							S	S	S							B	S	S						B			B		S	S	T	T		B							S		S	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		P	P	S	D	A	E	A	I	K	V	R	H	G	C	A	L	G	S	I	V	G	K	D	E	S	V	E	V	P	S	V	G	G	R	P	P	R	S	L	Q	.	.	.	.	R	Q	T	L	A	E	V	I	E	P	R	Y	T	E	L	L	N	L	V	N	E	E	I	L	Q	L	Q	E	K	L	R	Q	Q	G	V	K
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	G	E	A	A	H	A	Q	L	D	A	L	A	A	E	V	P	A	G	A	D	G	L	V	C	L	P	Y	F	L	G	D	P	F	A	S	G	T	F	T	G	L	S	L	S	H	T	R	G	H	L	W	R	A	L	L	E	A	V	A	L	A	F	R	H	H	V	A	V	L	D	D	I	.	.	.	.	.	.	.
Template Known Secondary structure			T	T												T	S		T	T	G	G	G							T	T			T	T							S			T	T																													.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		H	H	L	A	A	G	I	V	L	T	G	G	A	A	Q	I	E	G	L	A	A	C	A	Q	R	V	F	H	T	Q	V	R	I	G	A	P	L	N	I	T	G	L	T	D	Y	A	Q	E	P	Y	Y	S	T	A	V	G	L	L	H	Y	G	K	E	.	.	.	S	H	L	N	G	E	A	E	V	E	K	R	V	T
Query Conservation																																																																	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.					.													.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		G	H	A	P	Q	R	F	F	A	S	D	G	G	T	R	S	R	V	W	X	G	I	X	A	D	V	L	Q	R	P	V	Q	L	L	.	.	.	.	.	.	.	.	.	.	.	.	A	N	P	L	.	G	S	A	V	G	A	A	W	V	A	A	I	G	G	G	D	D	L	G	W	D	D	V	R	T	G	E	K	I
Template Known Secondary structure		T										S	G	G	G	G													T	S						.	.	.	.	.	.	.	.	.	.	.	.			T	T	.														T	T	S	S	S		G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.													.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	G	S	W	I	K	R	L	N	S	W	L	R	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	D	P	A	K	A	E	V	Y	D	R	L	Y	R	D	F
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.