Job Description P0ABH0 Confidence 98.59% Date Thu Jan 5 11:15:29 GMT 2012 Rank 60 Aligned Residues 264 % Identity 15% Template c3htvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution Resolution 1.95 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	K	L	V	V	G	L	E	I	G	T	A	K	V	A	A	L	V	G	E	V	L	P	D	G	M	V	N	I	I	G	V	G	S	C	P	S	R	G	M	D	K	G	G	V	N	D	L	E	S	V	V	K	C	V	Q	R	A	I	D	Q	A	E	L	M	A	D	C	Q	I	S	S	V	Y	L	A	L	S	G
Query Conservation
Alig confidence																					.	.																			.	.	.	.	.	.	.	.
Template Conservation																					.	.																			.	.	.	.	.	.	.	.
Template Sequence		Q	H	N	V	V	A	G	V	D	X	G	A	T	H	I	R	F	C	L	.	.	R	T	A	E	G	E	T	L	H	C	E	K	K	R	T	A	E	V	.	.	.	.	.	.	.	.	I	A	P	G	L	V	S	G	I	G	E	X	I	D	E	Q	L	R	R	F	N	A	R	C	H	G	L	V	X	G	F	P	A
Template Known Secondary structure													S	S							.	.			T	T	S														.	.	.	.	.	.	.	.		T	T																		T											S	S
Template Predicted Secondary structure																					.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		86		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		K	.	H	I	S	C	Q	N	E	I	G	M	V	P	I	S	E	E	E	V	T	Q	E	D	V	E	N	V	V	H	T	A	K	S	V	R	V	R	D	E	H	R	V	L	H	V	I	P	Q	E	Y	A	I	D	Y	Q	E	G	I	K	N	P	V	G	L	S	G	V	R	M	Q	A	K	V	H	L	I	T	C	H
Query Conservation			.
Alig confidence			.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	S	K	D	K	R	T	I	I	S	T	P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B		T	T	S	S		B		S			S	S	S							T	T										T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	M	A	K	N	I	V	K	A	V	E	R	C	G	L	K	V	D	Q	L	I	F	A	G	L	A	S	S	Y	S	V	L	T	E	D	E	R	E	L	G	V	C	V	V	D	I	G	G	G	T	M	D	I	A	V	Y	T	G	G	A	L	R	H	T	K	V	I	P	Y	A	G	N	V	V	T	S	D	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	F	S	R	D	V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G	T	G	X	G	F	A	V	W	X	N	G	A	P	W	T	G	A	H	G	V	A	G	E	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T		T	T	S								S	S	S								T	T						S	S	S					.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template SS confidence
																				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		Y	A	F	G	T	P	P	S	D	A	E	A	I	K	V	R	H	G	C	A	L	G	S	I	V	G	K	D	E	S	V	E	V	P	S	V	G	G	R	P	P	R	S	L	Q	R	Q	T	L	A	E	V	I	.	.	E	P	R	Y	T	E	L	L	N	L	V	N	E	E	I	L	Q	L	Q	E	K	L	R	Q	Q
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	N	C	S	G	X	A	L	R	R	W	Y	E	Q	Q	P	R	N	Y	P	L	R	D	L	F	V	H	A	E	N	A	P	F	V	Q	S	L	L	E	N	A	A	R	A	I	A	T	S	I	N	L	F	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S									T	T	S			S	S		G	G	G						T	T																							.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Template SS confidence
																										185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																				.	.	.	.	.															.	.	.	.	.
Query SS confidence																				.	.	.	.	.															.	.	.	.	.
Query Sequence		G	V	K	H	H	L	A	A	G	I	V	L	T	G	G	A	A	Q	.	.	.	.	.	I	E	G	L	A	A	C	A	Q	R	V	F	H	T	.	.	.	.	.	Q	V	R	I	G	A	P	L	N	I	T	G	L	T	D	Y	A	Q	E	P	Y	Y	S	T	A	V	G	L	L	H	Y	G	K	E	S	H	L
Query Conservation																				.	.	.	.	.															.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.	.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	D	P	D	A	V	I	L	G	G	G	V	X	D	X	P	A	F	P	R	E	T	L	V	A	X	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	.	.	.	.	.	.	.	.	.	.	S	D	F	N	G	A	Q	G	A	A	I	L	A	H	Q	R	F	L
Template Known Secondary structure		.	.	.	.	.			S							T	T	T	T	S	T	T													T	S		T	T	T	T	T	T	T									.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
							238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.											.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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