Job Description P0ABH0 Confidence 100.00% Date Thu Jan 5 11:15:29 GMT 2012 Rank 4 Aligned Residues 324 % Identity 19% Template c2ychA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:competence protein pilm; PDBTitle: pilm-piln type iv pilus biogenesis complex Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	V	V	G	L	E	I	G	T	A	K	V	A	A	L	V	G	E	V	L	P	D	G	M	V	N	I	I	G	V	G	S	C	P	S	R	G	M	D	K	G	G	V	N	D	L	E	S	V	V	K	C	V	Q	R	A	I	D	Q	A	E	L	M	A	D	C	Q	I	S	S	V	Y	L	A	L	S	G	K
Query Conservation
Alig confidence																						.																																									.	.	.	.
Template Conservation																						.																																									.	.	.	.
Template Sequence		R	V	E	A	L	G	L	E	I	G	A	S	A	L	K	L	V	E	V	S	.	G	N	P	P	A	L	K	A	L	A	S	R	P	T	P	P	G	L	L	X	E	G	X	V	A	E	P	A	A	L	A	Q	E	I	K	E	L	L	L	E	.	.	.	.	A	R	T	R	K	R	Y	V	V	T	A	L	S	N	L
Template Known Secondary structure												S	S									.	T	T	T	T												T	T	S			T	T			S																.	.	.	.		T												G	G
Template Predicted Secondary structure																						.																																									.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	S	C	Q	N	E	I	G	M	V	P	I	S	E	E	E	V	T	Q	E	D	V	E	N	V	V	H	T	A	K	S	V	R	V	R	D	E	H	R	V	L	H	V	I	P	Q	E	Y	A	I	D	Y	Q	E	G	I	K	N	P	V	G	L	S	G	V	R	M	Q	A	K	V	H	L	I	T	C	H	N	D
Query Conservation
Alig confidence													.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	I	L	R	P	I	Q	V	P	K	.	.	.	.	.	.	X	P	L	K	E	X	E	E	A	V	R	W	E	A	E	R	Y	I	P	F	P	I	E	V	V	L	D	F	.	.	.	.	.	.	.	.	.	.	A	P	L	T	P	L	S	E	V	Q	E	G	E	Q	V	Q	V	X	V	A	A	A	R	Q	E
Template Known Secondary structure		G											.	.	.	.	.	.															G	G	G		S	S									.	.	.	.	.	.	.	.	.	.			S	S		G	G	G	S		T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		M	A	K	N	I	V	K	A	V	E	R	C	G	L	K	V	D	Q	L	I	F	A	G	L	A	S	S	Y	S	V	.	.	L	T	E	D	E	R	E	L	G	V	C	V	V	D	I	G	G	G	T	M	D	I	A	V	Y	T	G	G	A	L	R	H	T	K	V	I	P	Y	A	G	N	V	V	T	S	D	I	A
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		A	V	A	G	V	L	E	A	L	R	G	A	G	L	V	P	V	V	L	D	V	K	P	F	A	G	L	Y	P	L	E	A	R	L	A	E	E	P	D	R	V	F	L	V	L	D	I	G	A	E	S	T	S	L	V	L	L	R	G	D	K	P	L	A	V	R	V	L	T	L	S	G	K	D	F	T	E	A	I	A
Template Known Secondary structure													T	T													T	T	G	G	G						T	S	T	T										S	S									T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	F	G	T	P	P	S	D	A	E	A	I	K	V	R	H	G	C	A	L	G	S	I	V	G	K	D	E	S	V	E	V	P	S	V	G	G	R	P	P	R	S	L	Q	R	Q	T	L	A	E	V	I	E	P	R	Y	T	E	L	L	N	L	V	N	E	E	I	L	Q	L	Q	E	K	L	R	Q	Q	G	V
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		R	S	F	N	L	D	L	L	A	A	E	E	V	K	R	T	Y	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	D	A	I	R	P	V	L	V	E	L	T	Q	E	L	R	R	S	L	E	F	F	R	I	.	.	.	.	.	.	.
Template Known Secondary structure				T	T													T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																														.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.									370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		K	H	H	L	A	A	G	I	V	L	T	G	G	A	A	Q	I	E	G	L	A	A	C	A	Q	R	V	F	H	T	Q	V	R	I	G	A	P	L	N	I	T	G	L	T	D	.	.	.	.	.	.	.	.	Y	A	Q	E	P	Y	Y	S	T	A	V	G	L	L	H	Y	G	K	E
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence		.																																													.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	Q	L	S	P	E	V	G	Y	L	L	G	G	G	S	K	L	R	G	L	A	S	L	L	T	D	T	L	G	V	N	L	E	P	V	N	P	W	E	A	V	A	V	D	P	K	R	F	E	S	E	Q	L	Q	E	I	G	P	E	F	A	V	A	L	G	L	A	L	R	G	V	E
Template Known Secondary structure		.					S						S	G	G	G	G	S	T	T										T	S							G	G	G	G	S	B			T	T	T	S																							T
Template Predicted Secondary structure		.
Template SS confidence
			301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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