 |
Job Description | P0ABH0 | Confidence | 41.68% | Date | Thu Jan 5 11:15:29 GMT 2012 |
Rank | 165 | Aligned Residues | 91 |
% Identity | 21% | Template | c2dwuA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:glutamate racemase; |
PDBTitle: crystal structure of glutamate racemase isoform race1 from bacillus2 anthracis
|
Resolution | 1.60 Å |
|
 |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | V | N | E | E | I | L | Q | L | Q | E | K | L | R | Q | Q | G | V | K | H | H | L | A | A | G | I | V | L | T | G | G | A | A | Q | I | E | G | L | A | A | C | A | Q | R | V | F | H | T | Q | V | R | I | G | A | P | L | N | I | T | G | L | T | D | Y | A | Q | E | P | Y | Y | S | T | A | V | G | L | L | H | Y |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
A | Y | V | T | Q | Q | V | K | Q | A | L | L | P | L | T | K | E | D | I | D | . |
. |
. |
. |
. |
. |
. |
T | L | I | L | G | C | T | H | Y | P | L | L | E | S | Y | I | K | K | E | L | G | E | D | V | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | S | S | A | E | E | T | A | I | E | L | S | T | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S | . | . | . | . | . | . | . |  |  |  |  |
| S | T | T | G | G | G | G |  |  |  |  |  |  |  |  |
| T | T | S |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
  |
  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | |
|
|
. | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | E | S | H | L | N | G | E | A | E | V | E | K | R | V | . |
. |
. |
T | A | S | V | G | S | W | I | K | R | L | N | S | W | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | Q | H | K | G | I | L | A | D | N | L | N | P | K | H | R | F | F | T | T | G | S | V | S | S | F | E | H | I | A | E | R | W | L |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|
|
|
| S | S |
|
|
|  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|