Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABH0
Confidence100.00%DateThu Jan 5 11:15:29 GMT 2012
Rank9Aligned Residues329
% Identity19%Templatec1hpmA_
PDB info PDB header:hydrolase (acting on acid anhydrides)Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30...... ...40.........50 .........60..... ..
Predicted Secondary structure 







....







............
......
Query SS confidence 


























. . . .













. . . . . . . . . . . .














. . . . . .

Query Sequence  VVGLEIGTAKVAALVGEVLPDGMVNII. . . . GVGSCPSRGMDKGG. . . . . . . . . . . . VNDLESVVKCVQRAI. . . . . . DQ
Query Conservation 








 
   
          
 ....     

     
 ............
 
       
   
......  
Alig confidence 
















...






....













............














......

Template Conservation 




 


   

   ...      
    
    

 
         
  
               
  
        
Template Sequence  AVGIDLGTTYSCVGVFQ. . . HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV
Template Known Secondary structure 


SS...TT


TTS
SS


SS
TTTTTT
GGG

GGGTTT

TT
Template Predicted Secondary structure 


...





















Template SS confidence 















































































   6...10.........20.. .......30.........40.........50.........60.........70.........80..
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  AELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPV
Query Conservation             
                        
    
                  
   
               
Alig confidence 



































































............
Template Conservation                                     

    
  
                  

   ............
Template Sequence  VQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF. . . . . . . . . . . .
Template Known Secondary structure  TT
SSTTTT
TS



TT
............
Template Predicted Secondary structure 























............
Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150
 
   148.150.........160.........170.........180.........190......... 200.........210.........220.....
Predicted Secondary structure 













..











Query SS confidence 



















































. .

























Query Sequence  GLSGVRMQAKVHLITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTE. . DERELGVCVVDIGGGTMDIAVYTGGA
Query Conservation            
  
            
   


    
  
  
 
      ..      
 




  

 
 
     
Alig confidence  ................



































..

























Template Conservation  ................       
  
           
 
  
                 



 
   
         
Template Sequence  . . . . . . . . . . . . . . . . NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED
Template Known Secondary structure  ................
TT
TTTTS

SS

SS
T
Template Predicted Secondary structure  ................






















Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210....
 
   226...230.........240.........250........ .260.........270.........280.....
Predicted Secondary structure  .....



...............















Query SS confidence  . . . . .
































. . . . . . . . . . . . . . .


























Query Sequence  . . . . . LRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIK. . . . . . . . . . . . . . . VRHGCALGSIVGKDESVEVPSVGGRPP
Query Conservation  .....         

  

  

  
      

  
...............                           
Alig confidence  .....
































...............


























Template Conservation                
   

  
                              
  
            
          
Template Sequence  GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFY
Template Known Secondary structure  TTT
SS


TT
TTTSSTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   286...290.........300.........310.........320.........330.........340.........350... ......360....
Predicted Secondary structure 













.




Query SS confidence 



































































.










Query Sequence  RSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFH. TQVRIGAPLNI
Query Conservation    

      

      
   
   
      
         
  


 

 
 

 
   
     .  
 
  
   
Alig confidence 



























.......
































.





.....
Template Conservation    
    
  
       
   
   
 .......        
  





 
    
   
        
   .....
Template Sequence  TSITRARFEELNADLFRGTLDPVEKALR. . . . . . . DAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKS. . . . .
Template Known Secondary structure  T.......T

GGG

SGGGG
TTT


B
S.....
Template Predicted Secondary structure  .......



















.....
Template SS confidence 















































































   295....300.........310.........320.. .......330.........340.........350.........360..
 
   365....370.........380........
Predicted Secondary structure 





Query SS confidence 























Query Sequence  TGLTDYAQEPYYSTAVGLLHYGKE
Query Conservation           
    
 

      
Alig confidence  .......
















Template Conservation  .......  
  


 


     
Template Sequence  . . . . . . . INPDEAVAYGAAVQAAI
Template Known Secondary structure  .......S
TTT
Template Predicted Secondary structure  .......

Template SS confidence 























   363......370.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions